Jonathan Schaul
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jonsch.one
Jonathan Schaul
@jonsch.one
biomedical / data science background. i like to build web applications.
Reposted by Jonathan Schaul
Science in 2025
November 21, 2025 at 1:38 PM
Reposted by Jonathan Schaul
📍 Latest OmniPath paper is out now! ➡️ academic.oup.com/nar/advance-...
🥁 Check out our new preprint on OmniPath, the prior knowledge resource for #SystemsBiology, and its brand-new OmniPath Explorer web app! 🥳

📖 Preprint: www.biorxiv.org/content/10.1...
🔍 Explorer: explore.omnipathdb.org

OmniPath integrates 160+ resources for multi-omics analysis & modeling.

🧶⬇️
November 20, 2025 at 10:09 AM
Reposted by Jonathan Schaul
Preprint alert 🚨 Do you use chatbots in your work or even build MCP servers and agentic systems yourself?

Or would you like to find a way to use biomedical tools using natural language?

Then check out biocontext.ai, now out on bioRxiv: www.biorxiv.org/content/10.1...
July 29, 2025 at 12:41 PM
Reposted by Jonathan Schaul
Decoupling.
🇺🇲 Google ---> 🇪🇺 Ecosia
🇺🇲 Chrome ---> 🇪🇺 Vivaldi
🇺🇲 Translate ---> 🇪🇺 DeepL
🇺🇲 Gmail ---> 🇪🇺 Mailfence
🇺🇲 Maps ---> 🇪🇺 Here WeGo
🇺🇲 ChatGPT ---> 🇪🇺 Le Chat
March 1, 2025 at 8:11 AM
Writing software with AI gives you remarkable leverage on your taste. The gap between taste and skill is now smaller than ever before—and it's continuously shrinking with each new model release.

youtu.be/G6uBAwVrxHw?...
The State of Software Engineering 🔨 — with Kent Beck
YouTube video by Refactoring
youtu.be
December 12, 2024 at 10:32 AM
next iteration :)
December 5, 2024 at 12:49 PM
Currently thinking about how to effectively visualize signaling pathways.
Here is what i came up with today: protein-visualization.vercel.app

Let me know what you think :)
December 4, 2024 at 12:03 PM
Reposted by Jonathan Schaul
Use your domain as your Bluesky handle. Get started with one-click on Vercel.

vercel.com/changelog/ve...
Vercel now supports one-click Bluesky DNS configuration - Vercel
The best way to deploy your Next.js site.
vercel.com
November 15, 2024 at 3:40 PM