John Alroy
johnalroy.bsky.social
John Alroy
@johnalroy.bsky.social
Biodiversity and extinction researcher
Back that up. What exactly is wrong, how is it not addressed in the 16 section-long discussion, and how is my main argument affected? Take another look at Fig. 5A, for example. "A better alternative is the Poisson log-normal distribution" (O'Hara 2005), but assuming it invalidates H and D.
July 25, 2025 at 11:53 PM
Fisher's alpha goes down, not up, as more stems are randomly drawn from across the BCI plot (upper green line). But it goes up if stems are drawn in order going SW-to-NE across the plot (lower). Chao 1 rises steeply (red). CEGS doesn't (upper blue) while capturing the area signal (lower blue).
May 7, 2025 at 11:12 AM
Methods matter! BCI tree diversity partitioned by size class (5 cm DBH running window). CEGS (blue): flat, then a sudden drop ~40 cm. Chao 1: lower, different, and higher variance. CBR/alpha/theta (orange/purple/pink): ~50% increase on the way up to ~25 cm. But diversity should always decline.
May 1, 2025 at 2:32 AM
The BCI manuscript is now done. The log series and ZSM fit the overall 50 ha data poorly. They predict the 1 ha subplot data just as poorly (last post) and underestimate beta diversity (new graph). CEGS is of course best. Manuscript available upon request: comments would be very much appreciated.
April 28, 2025 at 1:00 AM
CEGS wins again. Predictive test based on the 50 ha BCI tree plot dataset of Hubbell/Foster/Condit (thanks). CEGS fits to species counts in 1 ha plots better predict counts in 9 plots to the east (blue). PLN wins once (red). Log series loses every time. Likelihood ratio cutoff is 10:1.
April 27, 2025 at 12:16 AM
No problem. It's CEGS. Here's a "subsample at random and estimate richness" analysis of the classic BCI data set of Condit et al. (1996). CEGS asymptotes almost immediately. OPR is much the same. ACE and Chao 1 are way off, consistent with your results. Great paper, I totally agree with it.
April 18, 2025 at 7:25 AM