Jacques Dainat
@jacquesdainat.bsky.social
PhD Bioinformatics, Bioinformatician at @IRD_fr previously @Alcediag_Alcen and @NBISwe @scilifelab @uppsalauni, Annotation Assembly Epigenetic Pipeline Software Reproducibility
https://github.com/Juke34
https://github.com/Juke34
Glad to attend the @nf-co.re #Hackathon from Montpellier! Great collaboration, inspiring discussions, and lots of fun 🚀 #bioinformatics
March 24, 2025 at 5:33 PM
Glad to attend the @nf-co.re #Hackathon from Montpellier! Great collaboration, inspiring discussions, and lots of fun 🚀 #bioinformatics
My latest #Nextflow pipeline has just been published in JOSS 🎉
Just published in JOSS: 'AliNe: A Flexible and Efficient Nextflow Pipeline for Read Alignment' https://doi.org/10.21105/joss.07545
March 15, 2025 at 7:45 PM
My latest #Nextflow pipeline has just been published in JOSS 🎉
Reposted by Jacques Dainat
📰 Vous n'avez rien compris au changement de licence Anaconda ? 🐍 On vous explique pourquoi et comment se mettre en règle :
https://bioinfo-fr.net/conda-et-le-piege-de-la-licence-anaconda
#bioinfofr #anaconda #conda
https://bioinfo-fr.net/conda-et-le-piege-de-la-licence-anaconda
#bioinfofr #anaconda #conda
Conda et le piège de la licence Anaconda - Bioinfo-fr.net
Conda est apparu en 2012 et a été distribué par Continuum Analytics, connue sous le nom d’Anaconda Inc depuis 2017. Conda est distribué sous la licence MIT, l’une des licences open-source les plus permissives, permettant aux utilisateurs d’adopter, d’adapter et de partager le logiciel presque sans restrictions. Conda a été conçu pour gérer les environnements […]
bioinfo-fr.net
February 12, 2025 at 9:02 AM
📰 Vous n'avez rien compris au changement de licence Anaconda ? 🐍 On vous explique pourquoi et comment se mettre en règle :
https://bioinfo-fr.net/conda-et-le-piege-de-la-licence-anaconda
#bioinfofr #anaconda #conda
https://bioinfo-fr.net/conda-et-le-piege-de-la-licence-anaconda
#bioinfofr #anaconda #conda
Reposted by Jacques Dainat
Super excited for the distributed nf-core hackathon! We've got 36+ local sites being organized in over 20 countries! Registration is now open!
Calling all bioinformatics enthusiasts! Join a global network of @nextflow.io ninjas for the @nf-co.re hackathon from March 24-26, 2025 🎉
Collaborate remotely or at one of the 36+ local sites worldwide (🇦🇷🇦🇺🇧🇪🇧🇷🇨🇦🇨🇴🇨🇿🇩🇰🇪🇹🇫🇷🇩🇪🇬🇭🇬🇷🇮🇳🇮🇹🇳🇱🇳🇿🇵🇰🇵🇱🇿🇦🇪🇸🇸🇪🇨🇭🇹🇷🇬🇧🇺🇸).
Registration is now open! 🎟
nf-co.re/events/2025/...
Collaborate remotely or at one of the 36+ local sites worldwide (🇦🇷🇦🇺🇧🇪🇧🇷🇨🇦🇨🇴🇨🇿🇩🇰🇪🇹🇫🇷🇩🇪🇬🇭🇬🇷🇮🇳🇮🇹🇳🇱🇳🇿🇵🇰🇵🇱🇿🇦🇪🇸🇸🇪🇨🇭🇹🇷🇬🇧🇺🇸).
Registration is now open! 🎟
nf-co.re/events/2025/...
Hackathon - March 2025 (Online / Distributed)
A virtual hackathon with local sites to develop nf-core together
nf-co.re
February 4, 2025 at 2:26 PM
Super excited for the distributed nf-core hackathon! We've got 36+ local sites being organized in over 20 countries! Registration is now open!
Reposted by Jacques Dainat
🚨BREAKING. From a program officer at the National Science Foundation, a list of keywords that can cause a grant to be pulled. I will be sharing screenshots of these keywords along with a decision tree. Please share widely. This is a crisis for academic freedom & science.
February 4, 2025 at 1:26 AM
🚨BREAKING. From a program officer at the National Science Foundation, a list of keywords that can cause a grant to be pulled. I will be sharing screenshots of these keywords along with a decision tree. Please share widely. This is a crisis for academic freedom & science.
Reposted by Jacques Dainat
Registration to our #rstats Summer School RaukR 2025 Beyond The Basics is open! Don't miss the opportunity to elevate your R skillset! #r #datascience #bioinformatics #NBISweden @scilifelab.se
January 20, 2025 at 1:48 PM
Registration to our #rstats Summer School RaukR 2025 Beyond The Basics is open! Don't miss the opportunity to elevate your R skillset! #r #datascience #bioinformatics #NBISweden @scilifelab.se
I’m thrilled to join the first cohort of 2025 Nextflow Ambassadors! seqera.io/blog/welcome...
I'm still promoting #Nextflow and highlighting its incredible potential in #Bioinformatics, but with an Nextflow ambassador hat on now.It's good to be supported, thx @mribeirodantas.bsky.social @nextflow.io
I'm still promoting #Nextflow and highlighting its incredible potential in #Bioinformatics, but with an Nextflow ambassador hat on now.It's good to be supported, thx @mribeirodantas.bsky.social @nextflow.io
Join us in welcoming the first cohort of 2025 Nextflow Ambassadors | Seqera
It's time to welcome the new ambassadors who joined the Nextflow Ambassador Program for the 2025.1 semester.
seqera.io
January 21, 2025 at 12:28 PM
I’m thrilled to join the first cohort of 2025 Nextflow Ambassadors! seqera.io/blog/welcome...
I'm still promoting #Nextflow and highlighting its incredible potential in #Bioinformatics, but with an Nextflow ambassador hat on now.It's good to be supported, thx @mribeirodantas.bsky.social @nextflow.io
I'm still promoting #Nextflow and highlighting its incredible potential in #Bioinformatics, but with an Nextflow ambassador hat on now.It's good to be supported, thx @mribeirodantas.bsky.social @nextflow.io
Reposted by Jacques Dainat
NBIS is seeking a #Nextflow pipeline developer ( permanent position ) in Uppsala, Sweden. www.uu.se/en/about-uu/.... Come join us and don't forget to include your Github/Gitlab/developer profile.
Bioinformatician in pipeline development - Uppsala University
Bioinformatician in pipeline development, Department of Cell and Molecular Biology, Uppsala University
www.uu.se
December 10, 2024 at 8:32 AM
NBIS is seeking a #Nextflow pipeline developer ( permanent position ) in Uppsala, Sweden. www.uu.se/en/about-uu/.... Come join us and don't forget to include your Github/Gitlab/developer profile.
Reposted by Jacques Dainat
November 26, 2024 at 8:47 PM
Day 2 of training to explore ANVIO with @tomdelmont.bsky.social at IRD Montpellier: an incredibly enriching experience! 🚀 #Bioinformatics #ANVIO
November 20, 2024 at 6:50 PM
Day 2 of training to explore ANVIO with @tomdelmont.bsky.social at IRD Montpellier: an incredibly enriching experience! 🚀 #Bioinformatics #ANVIO
Avoiding the pitfalls of Anaconda license changes: a practical guide
juke34.github.io/fix-anaconda...
juke34.github.io/fix-anaconda...
Home - Avoiding the Pitfalls of the Anaconda License
Avoid conda licensing issues
juke34.github.io
November 13, 2024 at 9:47 PM
Avoiding the pitfalls of Anaconda license changes: a practical guide
juke34.github.io/fix-anaconda...
juke34.github.io/fix-anaconda...