Jacob Parres-Gold
jacobparresau.bsky.social
Jacob Parres-Gold
@jacobparresau.bsky.social
A biochemistry PhD candidate at Caltech in the Elowitz Lab studying systems and synthetic biology! First-gen and Cal State LA alum! He/Him
We demonstrate that dimerization networks can readily compute complex three- and four-input logic gates, like the complex "exactly any 2 or None" gate shown here
February 26, 2025 at 2:17 AM
Further, the SAME set of proteins can compute DIFFERENT functions in different cell types, simply by expressing the protein components at different levels
February 26, 2025 at 2:17 AM
Using a computational model, we first found that dimerization networks can compute a wide variety of complex and multi-input functions
February 26, 2025 at 2:17 AM
These dimerization networks act as biochemical computers: Input signals regulate individual monomers, which then form output dimers that regulate downstream gene expression.
February 26, 2025 at 2:17 AM
The motif of "many-to-many" binding interactions can be found at all levels of cell signaling. Here we focused on systems in which multiple monomers competitively dimerize in different combinations, such as in the bHLH and bZIP transcription factors.
February 26, 2025 at 2:17 AM
How can different cell types use protein interaction networks to make decisions based on multiple signals?
February 26, 2025 at 2:17 AM