Samay Pande
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iamsamayp.bsky.social
Samay Pande
@iamsamayp.bsky.social
Microbial ecology and evolution. Indian Institute of Science Bangalore.
https://www.redqueenlab.com/
Big thanks to Rekha (lead), an absolute rockstar who drove the project, and Jyotsna for pushing this work forward!
Also grateful to our collaborator Prof. Siva Umapathy for the Raman spectroscopy expertise.
September 3, 2025 at 8:03 PM
This is one of the first demonstrations linking biochemical markers of spores to their germination efficiency, using a non-invasive, label-free approach.
September 3, 2025 at 8:03 PM
Most excitingly, these Raman spectral features of mature spores correlated strongly with germination efficiency across natural soil isolates of M. xanthus.

Meaning: Raman spectra can serve as predictive markers of germination success.
September 3, 2025 at 8:03 PM
We found that:
1. Lipid and protein signatures shift dynamically during sporulation
2. Carotenoids accumulate in spores (stress protection!)
3. Nucleic acid signatures become compacted
September 3, 2025 at 8:03 PM
Using single-cell Raman spectroscopy, we tracked key biochemical changes (lipids, proteins, nucleic acids, carotenoids) as M. xanthus transitioned from vegetative cells into spores.
September 3, 2025 at 8:03 PM
Dormancy is one of the most widespread microbial survival strategies — from spores to persisters to VBNCs. But how do we predict which spores will successfully germinate and “wake up” again?
September 3, 2025 at 8:03 PM
Congrats Glen. This sounds interesting. Look forward to reading it.
June 13, 2025 at 12:10 PM
Big kudos to @sahelis.bsky.social , Sneha, and @vaibhav-sharma.bsky.social ! Stay tuned for more stories on how microbial predation affects the evolution of resistance in pristine environments.
June 4, 2025 at 4:14 PM
Thus, microbial interactions in pristine environments can influence the evolvability of pathogens long before clinical antibiotic exposure.
June 4, 2025 at 4:14 PM
These findings are important because: Resistance traits arising under biotic stress may be less constrained, and potentially more evolutionarily potent, than those shaped in antibiotic-only settings.
June 4, 2025 at 4:14 PM
Our work demonstrates that coevolutionary history with a predator influences not only present-day survival but also the trajectory, speed, and cost of future adaptations, such as antibiotic resistance.
June 4, 2025 at 4:14 PM
While abiotic influences on evolvability have been widely studied, the historical contingencies of antagonisms, such as microbial predation, remain underexplored.
June 4, 2025 at 4:14 PM