Love thy k nearest neighbours

When running alot of code in my notebooks, I love printing this image at the end, so that one glance at my laptop tells me whether it's done

𝗦𝗽𝗶𝗿𝗶𝘁𝗮𝗲
The spirit of the manifold arises from the spirits of all parts. We are all connected to each other, but also we are all individuals.

Favourite wrapper package: cyCONDOR (github.com/lorenzobonag...)

Favourite pseudotime algotithm: Palantir (github.com/dpeerlab/Pal...)

Favourite clustering algorithm: Phenograph (github.com/dpeerlab/Phe...)

Big fan of @danapeer.bsky.social
Amazing algorithms for single cell data (I especially love Phenograph + Palantir), very robust and reasonable, highly recommend trying them.
Also check her talks on YouTube!