Andrew Hayes
@hayesscience.bsky.social
Computational biologist specialising in microbiology and phylogenetics.
Reposted by Andrew Hayes
Exploring epidemiology and lineage dynamics of invasive S. pyogenes across diverse regions of Australia. doi.org/10.1016/j.la....
Exciting new research published in @lancetmicrobe.bsky.social
Posting on behalf of Ouli Xie (not on bsky) and our lab with Mark Davies. @thedohertyinst.bsky.social
Exciting new research published in @lancetmicrobe.bsky.social
Posting on behalf of Ouli Xie (not on bsky) and our lab with Mark Davies. @thedohertyinst.bsky.social
Redirecting
doi.org
April 7, 2025 at 2:13 PM
Exploring epidemiology and lineage dynamics of invasive S. pyogenes across diverse regions of Australia. doi.org/10.1016/j.la....
Exciting new research published in @lancetmicrobe.bsky.social
Posting on behalf of Ouli Xie (not on bsky) and our lab with Mark Davies. @thedohertyinst.bsky.social
Exciting new research published in @lancetmicrobe.bsky.social
Posting on behalf of Ouli Xie (not on bsky) and our lab with Mark Davies. @thedohertyinst.bsky.social
Reposted by Andrew Hayes
Do you make core genome alignments for phylogenomics? Mona Taouk and I explored how including sites with some missing data (a soft core) can improve analysis, especially for large datasets.
www.microbiologyresearch.org/content/jour...
(1/4)
www.microbiologyresearch.org/content/jour...
(1/4)
Exploring SNP filtering strategies: the influence of strict vs soft core
Phylogenetic analyses are crucial for understanding microbial evolution and infectious disease transmission. Bacterial phylogenies are often inferred from SNP alignments, with SNPs as the fundamental ...
www.microbiologyresearch.org
January 20, 2025 at 10:24 PM
Do you make core genome alignments for phylogenomics? Mona Taouk and I explored how including sites with some missing data (a soft core) can improve analysis, especially for large datasets.
www.microbiologyresearch.org/content/jour...
(1/4)
www.microbiologyresearch.org/content/jour...
(1/4)