Haris Zafeiropoulos
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hariszaf.bsky.social
Haris Zafeiropoulos
@hariszaf.bsky.social
microbial systems biologist, bioinformatician
hariszaf.github.io/
If you are interested in contributing a video article on your methods, either message me or submit an abstract here: app.jove.com/methods-coll...
JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
Jove
app.jove.com
December 8, 2025 at 3:27 PM
JoVE articles are indexed in PubMed, Web of Science, SciFinder, EMBASE, and Scopus.

Authors submit a traditional text manuscript, after which JoVE handles all the video production.
JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
Jove
app.jove.com
December 8, 2025 at 3:27 PM
New indices or predictive approaches, as well as research investigating the role or evolution of metabolic interactions in microbial communities, are also welcome.
JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
Jove
app.jove.com
December 8, 2025 at 3:27 PM
The purpose of this collection is to bring together methodological innovation, benchmarking strategies, and real-world applications that illuminate how complementary metabolic capabilities shape microbial interactions and ecosystem processes.
JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
Jove
app.jove.com
December 8, 2025 at 3:27 PM
If you worry about your data getting scooped, μGrowthDB provides embargo dates, so your data would only be publicly available after the expiration of that date.Meanwhile, your entry will already appear in the db, acknowledging your contribution & showing that you’ve done your part for the community.
October 14, 2025 at 8:59 AM
Transforming μGrowthDB into a truly representative resource of microbial culturing efforts would require a collective community effort.
Therefore, give it a shot and share your #FAIR data!
October 14, 2025 at 8:59 AM
microbetag comes as a Python package you can use on your own genomes or as an on-the-fly service mapping your taxa to their closest GTDB genomes
September 23, 2025 at 9:42 AM
DNNGIOR gapfiller: doi.org/10.1016/j.is...

dingo Python library for flux sampling: doi.org/10.1093/bioa...
Redirecting
doi.org
March 19, 2025 at 10:04 PM