The number of free subscriptions to @genomelybio.bsky.social substack has been steadily growing.

Super thankful folks find my BioAI and biotech development weeklys helpful. Looking forward to writing more deep dives in the future.

Appreciate you :)
open.substack.com/pub/genomely...

I decided to join in on the fun and write a popular science-y article about the recent manuscript. It is available on the @genomelybio.bsky.social Substack

Subscribe for free :D
genomely.substack.com/p/what-was-t...
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The @genomelybio.bsky.social SubStack is expanding and will now feature a weekly update on the top 10 biotech business developments based on deal size, event type, company star power, innovation factor, source credibility, and recency.

Here is the first post!

genomely.substack.com/p/top-10-bio...

BioAI Weekly: October 06 - 13

This week, 47 BioAI articles and posts (35 from research outlets and 12 community updates) were reviewed. Discussion centered on AI / machine learning applications in cell biology and human diseases.

#machinelearning #cell #disease

The Genomely substack is growing 😄🥳😄🥳!!

Subscribe for free :) genomely.substack.com

@genomelybio.bsky.social

BioAI Weekly: Sept 15 - 22

📊 This week: 203 articles analyzed, 36 community posts tracked, 10 trending topics identified

Full article here: genomely.substack.com/p/bioai-week...

An overview 🧵 below 👇

#AI #machinelearning #llms

There's a lot happening in AI, and we made a way to keep up.

@genomelybio.bsky.social will now post weekly reports about AI (& beyond). Eg, we examined & summarized 166 articles, 56 community posts (eg, from Reddit), and 10 trending topics (eg, from Bluesky)

genomely.substack.com/p/ai-weekly-...

Elated to share the PhyKIT protocols manuscript appeared on the cover of Current Protocols🥳🥳🥳
bsky.app/profile/jlst...

NEW Publication🥳 Solu enables easy genome-scale pathogen surveillance!

Solu is a cloud-based real-time #pathogen surveillance platform integrating privacy, speed & usability. It automatically assembles, characterizes & compares WGS data—no bioinformatics expertise required.

🔗: tinyurl.com/y8p24uya

This blog post is part of a general series I write about genomics, bioinformatics, academia, and beyond. You can subscribe for free if you'd like 😄

You can even tell your friends, your parents, your dog walking partner, and your loose acquaintances to subscribe 😆

genomely.substack.com

I wrote a blog post about OrthoHMM, which goes into slightly more depth than this thread.

If you have any questions or want clarifications, I would be happy to provide them :)
genomely.substack.com/p/improving-...

bsky.app/profile/jlst...

OrthoHMM v0.1.0 now handles the all-by-all search step differently by enabling better multiprocessing.

Now, multiple search commands can be executed in one step :)
github.com/JLSteenwyk/o...

bsky.app/profile/jlst...

Happy holidays, everyone!! 🫶

NEW preprint!🥳

Orthogroups are a prerequisite for comparative genomics and Tree of Life inquiries

Introducing #OrthoHMM, software that improves the inference of orthogroups (blue in fig)

OrthoHMM may refine our understanding of genome evolution and the Tree of Life

🔗 tinyurl.com/4s9mwxz6

🧵 1/8

Thank you again for your inquiry. Given that many people need to create graphical abstracts, I decided it might be most productive to write a blog post on the topic.

After organizing my thoughts, I'm happy to share them here on the @genomelybio.bsky.social blog. open.substack.com/pub/genomely...