Ora Furman Lab
@furmanlab.bsky.social
Structural basis of peptide-mediated protein communication and function @hebrewuniversity.bsky.social
Member of @rosettacommons.bsky.social
Posts by lab members.
Member of @rosettacommons.bsky.social
Posts by lab members.
Try it and let us know how it goes!
September 30, 2025 at 9:52 PM
Try it and let us know how it goes!
If you want to integrate it in your own AF3 installation, check the 3 files which only need a slight modification (model.py, confidences.py and confidence_types.py):
github.com/Kuhlman-Lab/...
github.com/Kuhlman-Lab/...
model.py
September 30, 2025 at 9:52 PM
If you want to integrate it in your own AF3 installation, check the 3 files which only need a slight modification (model.py, confidences.py and confidence_types.py):
github.com/Kuhlman-Lab/...
github.com/Kuhlman-Lab/...
We used the Kuhlman lab’s version of AF3, as this also makes the mmseqs2 server available for generating MSA (thank you Brian Kuhlman and Henry Dieckhaus):
github.com/Kuhlman-Lab/...
No flags required, actifptm is part of the output (also calculated between chains).
github.com/Kuhlman-Lab/...
No flags required, actifptm is part of the output (also calculated between chains).
GitHub - Kuhlman-Lab/alphafold3: Kuhlman Lab Installation of AlphaFold3
Kuhlman Lab Installation of AlphaFold3. Contribute to Kuhlman-Lab/alphafold3 development by creating an account on GitHub.
github.com
September 30, 2025 at 9:52 PM
We used the Kuhlman lab’s version of AF3, as this also makes the mmseqs2 server available for generating MSA (thank you Brian Kuhlman and Henry Dieckhaus):
github.com/Kuhlman-Lab/...
No flags required, actifptm is part of the output (also calculated between chains).
github.com/Kuhlman-Lab/...
No flags required, actifptm is part of the output (also calculated between chains).