Akifumi S. Tanabe
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fifthdimension.jp
Akifumi S. Tanabe
@fifthdimension.jp
Researcher on evolutionary community ecology. The main developer of Kakusan, Claident and ANEMONE DB.
Tutorial using example data and example analysis pipeline has been also updated. github.com/astanabe/Cla...
GitHub - astanabe/ClaidentTutorial: Tutorial scripts and data for Claident
Tutorial scripts and data for Claident. Contribute to astanabe/ClaidentTutorial development by creating an account on GitHub.
github.com
June 15, 2024 at 11:35 AM
使い捨てプラカップと使い捨てロープを使用するようになると、バケツやロープの漂白が不要になるため、大変手間が減って楽になります。また、外壁塗装に使われるアルミローラーポールの先端にロープを結べば、柄杓代わりにもなります。風が強くて水面に落とせないときは、精製水を入れて重くします。
June 15, 2024 at 11:33 AM
In the latest version, installer for macOS has been fixed. A bug of coverage-based rarefaction of ASV-saturated samples in clrarefysum has been fixed. A bug of outputmultihit option of clsplitseq has been fixed. The bundled databases have not been updated.
March 4, 2024 at 8:38 PM
In addition, decontamination based on DNA concentration estimated using concentration-known internal standard DNA has been supported in "clremovecontam" command.
February 15, 2024 at 11:28 AM
In the latest Claident, "clrarefysum" command has been added. By this command, coverage-based rarefaction can be performed quickly.
February 15, 2024 at 11:28 AM
And Japanese manual can be found at the following.
github.com/astanabe/eDN...
February 15, 2024 at 11:27 AM
Example analysis scripts are available at the following.
github.com/astanabe/Cla...
GitHub - astanabe/ClaidentTutorial: Tutorial scripts and data for Claident
Tutorial scripts and data for Claident. Contribute to astanabe/ClaidentTutorial development by creating an account on GitHub.
github.com
February 15, 2024 at 11:27 AM