Fanny Hartmann
@fannyhartmann.bsky.social
Evolutionary genomics, fungi
Assistant Professor University Paris Saclay
Assistant Professor University Paris Saclay
Reposted by Fanny Hartmann
Pourquoi l'effondrement de la biodiversité est-il au moins aussi préoccupant que le dérèglement climatique? Conférence et dédicaces de "L'attention au Vivant" le 27 novembre à Grenoble à 19h! Avec une intervention de @dorianguinard.bsky.social, de l'association La biodiversité sous nos pieds!
November 13, 2025 at 5:32 PM
Pourquoi l'effondrement de la biodiversité est-il au moins aussi préoccupant que le dérèglement climatique? Conférence et dédicaces de "L'attention au Vivant" le 27 novembre à Grenoble à 19h! Avec une intervention de @dorianguinard.bsky.social, de l'association La biodiversité sous nos pieds!
Reposted by Fanny Hartmann
1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start?
We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!
www.biorxiv.org/content/10.1...
We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!
www.biorxiv.org/content/10.1...
October 29, 2025 at 9:02 AM
1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start?
We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!
www.biorxiv.org/content/10.1...
We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes!
www.biorxiv.org/content/10.1...
Reposted by Fanny Hartmann
📣 Happy to see the journal publication 📄 of our work on Starships 🚀 in Verticillium fungi: terrific work led by @yukiyosato.bsky.social
rdcu.be/exBSp
rdcu.be/exBSp
Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution
Nature Communications - Giant transposons, known as ‘Starships’, mediate horizontal gene transfer between fungal genomes. Here, Sato et al. show that Starships occupy genome regions...
rdcu.be
July 24, 2025 at 10:40 AM
📣 Happy to see the journal publication 📄 of our work on Starships 🚀 in Verticillium fungi: terrific work led by @yukiyosato.bsky.social
rdcu.be/exBSp
rdcu.be/exBSp
Reposted by Fanny Hartmann
Sheltered load in fungal mating-type chromosomes revealed by fitness experiments
Guyot et al. @tatianagiraud.bsky.social
doi.org/10.1093/jeb/...
Guyot et al. @tatianagiraud.bsky.social
doi.org/10.1093/jeb/...
Validate User
doi.org
July 22, 2025 at 10:49 AM
Sheltered load in fungal mating-type chromosomes revealed by fitness experiments
Guyot et al. @tatianagiraud.bsky.social
doi.org/10.1093/jeb/...
Guyot et al. @tatianagiraud.bsky.social
doi.org/10.1093/jeb/...
Reposted by Fanny Hartmann
Happy to see this out! "Reconstructing NOD-like receptor alleles with high internal conservation in #Podospora anserina using long-read sequencing", now in @microbiologysociety.org! 🧬
Keep reading for a simple explanation 🧵 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...
Keep reading for a simple explanation 🧵 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...
Reconstructing NOD-like receptor alleles with high internal conservation in Podospora anserina using long-read sequencing
NOD-like receptors (NLRs) are intracellular immune receptors that detect pathogen-associated cues and trigger defence mechanisms, including regulated cell death. In filamentous fungi, some NLRs mediat...
www.microbiologyresearch.org
July 2, 2025 at 6:10 PM
Happy to see this out! "Reconstructing NOD-like receptor alleles with high internal conservation in #Podospora anserina using long-read sequencing", now in @microbiologysociety.org! 🧬
Keep reading for a simple explanation 🧵 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...
Keep reading for a simple explanation 🧵 1/n
#Fungi #Allorecognition
www.microbiologyresearch.org/content/jour...
Reposted by Fanny Hartmann
Our new paper is out!
We observed a loss of function in mating compatibility for HD genes for the first time in basidiomycete fungi, and new evolutionary strata in the absence of sexually antagonistic selection!
@tatianagiraud.bsky.social
More details here 👉 www.nature.com/articles/s41...
We observed a loss of function in mating compatibility for HD genes for the first time in basidiomycete fungi, and new evolutionary strata in the absence of sexually antagonistic selection!
@tatianagiraud.bsky.social
More details here 👉 www.nature.com/articles/s41...
Repeated loss of function at HD mating-type genes and of recombination in anther-smut fungi - Nature Communications
Basidiomycete fungi typically have two mating-type loci located on different chromosomes. Here, Lucotte et al. report the convergent loss-of-function of mating-type genes across several species of phy...
www.nature.com
June 3, 2025 at 11:18 AM
Our new paper is out!
We observed a loss of function in mating compatibility for HD genes for the first time in basidiomycete fungi, and new evolutionary strata in the absence of sexually antagonistic selection!
@tatianagiraud.bsky.social
More details here 👉 www.nature.com/articles/s41...
We observed a loss of function in mating compatibility for HD genes for the first time in basidiomycete fungi, and new evolutionary strata in the absence of sexually antagonistic selection!
@tatianagiraud.bsky.social
More details here 👉 www.nature.com/articles/s41...
Reposted by Fanny Hartmann
We did it! We caught Starship #transposons moving between #fungal species in the lab, including between species separated by ~100my. We think Starships are a mediator of HGT in fungi, akin to conjugative elements in bacteria. Check out the preprint. www.biorxiv.org/content/10.1...
March 7, 2025 at 7:18 AM
We did it! We caught Starship #transposons moving between #fungal species in the lab, including between species separated by ~100my. We think Starships are a mediator of HGT in fungi, akin to conjugative elements in bacteria. Check out the preprint. www.biorxiv.org/content/10.1...
Reposted by Fanny Hartmann
An inversion polymorphism under balancing selection, involving giant mobile elements, in the invasive fungal pathogen responsable for the chesnut blight disease!
doi.org/10.1093/molb...
doi.org/10.1093/molb...
An inversion polymorphism under balancing selection, involving giant mobile elements, in an invasive fungal pathogen
Abstract. Recombination suppression can evolve in sex or mating-type chromosomes, or in autosomal supergenes, with different haplotypes being maintained by
doi.org
February 11, 2025 at 9:24 AM
An inversion polymorphism under balancing selection, involving giant mobile elements, in the invasive fungal pathogen responsable for the chesnut blight disease!
doi.org/10.1093/molb...
doi.org/10.1093/molb...