Emili Collaboratory for Network, Systems & Spatial Biology
@e-cns2b.bsky.social
OHSU Knight Cancer Institute
emililab.org
emililab.org
Congratulations to Dr. Indranil Paul, Grace Potter, and the rest of the team!! for their collaborative effort on this manuscript that was recently accepted "OmNI: A Modular Open-Source Framework for Interactive Multi-Omics Data Integration and Visualization". A tool to integrate Multi-Omic data.
November 25, 2025 at 9:23 PM
Congratulations to Dr. Indranil Paul, Grace Potter, and the rest of the team!! for their collaborative effort on this manuscript that was recently accepted "OmNI: A Modular Open-Source Framework for Interactive Multi-Omics Data Integration and Visualization". A tool to integrate Multi-Omic data.
Congratulations to Dr. Avik Basu and the rest of the team!! Their recent paper on Photo-proximity labeling in live primary neurons has been accepted! Details to follow...
November 25, 2025 at 9:15 PM
Congratulations to Dr. Avik Basu and the rest of the team!! Their recent paper on Photo-proximity labeling in live primary neurons has been accepted! Details to follow...
A lot of awesome AI Research here at OHSU, topics include: clinical decision making, imaging, and population health. Learning a lot at the OHSU AI Research Summit 2025.
November 21, 2025 at 11:13 PM
A lot of awesome AI Research here at OHSU, topics include: clinical decision making, imaging, and population health. Learning a lot at the OHSU AI Research Summit 2025.
Dr. Emili gave a visionary presentation today at the OHSU Quantitative and Systems Biology: Visions for Systems Biology Seminar. Excellent talks from the other Faculty at OHSU: Drs. Andrew Adey, Kyle Ellrott, and Gregory Baker.
October 29, 2025 at 11:04 PM
Dr. Emili gave a visionary presentation today at the OHSU Quantitative and Systems Biology: Visions for Systems Biology Seminar. Excellent talks from the other Faculty at OHSU: Drs. Andrew Adey, Kyle Ellrott, and Gregory Baker.
This week, we welcomed Hiba Midouane to the Emili Lab at OHSU. She will be joining us to continue her research on neurodegenerative diseases. Hiba will learn and apply cutting edge proteomics tools to her research. We look forward to what Hiba will accomplish in her 1 year with the Emili Lab.
October 23, 2025 at 6:53 PM
This week, we welcomed Hiba Midouane to the Emili Lab at OHSU. She will be joining us to continue her research on neurodegenerative diseases. Hiba will learn and apply cutting edge proteomics tools to her research. We look forward to what Hiba will accomplish in her 1 year with the Emili Lab.
Drs. Emili and Paul are attending the "Early Detection of Cancer Conference" here in Portland, OR. Dr. Paul will be presenting a poster on the Emili Lab's latest ongoing efforts on the early detection of cancer, very fitting.
October 21, 2025 at 5:14 PM
Drs. Emili and Paul are attending the "Early Detection of Cancer Conference" here in Portland, OR. Dr. Paul will be presenting a poster on the Emili Lab's latest ongoing efforts on the early detection of cancer, very fitting.
The Emili Lab enjoyed a nice sunny morning at The Pumpkin Patch. We completed the Maize and had some muddy shoes at the end.
October 13, 2025 at 10:12 PM
The Emili Lab enjoyed a nice sunny morning at The Pumpkin Patch. We completed the Maize and had some muddy shoes at the end.
Dr. Emili gave a powerful talk at the Structural Proteomics Symposium 2025 in Milan on advancing the scientific toolkit to address molecular interactome questions. He ended his presentation by encouraging us to pioneer new technologies and tools.
October 7, 2025 at 5:21 PM
Dr. Emili gave a powerful talk at the Structural Proteomics Symposium 2025 in Milan on advancing the scientific toolkit to address molecular interactome questions. He ended his presentation by encouraging us to pioneer new technologies and tools.
Neha has completed her final Thesis Advisory Committee and will be working to wrap up her research. We enjoyed a nice Lab lunch get together to celebrate her time in the Emili Lab. We all wish Neha success as she works to finish her project and moves forward in her career.
October 2, 2025 at 10:29 PM
Neha has completed her final Thesis Advisory Committee and will be working to wrap up her research. We enjoyed a nice Lab lunch get together to celebrate her time in the Emili Lab. We all wish Neha success as she works to finish her project and moves forward in her career.
Great Job Neha Somalwar! for your great talk at the BME Student Seminar! Neha is a joint student in the Emili and Nan Laboratories.
September 12, 2025 at 8:09 PM
Great Job Neha Somalwar! for your great talk at the BME Student Seminar! Neha is a joint student in the Emili and Nan Laboratories.
Congratulations to new BME PhD graduate Brian Karlberg for successfully defending! Title: Cancer Molecular Subtyping: A Machine Learning Approach.
Congrats Dr. Karlberg!
Congrats Dr. Karlberg!
September 12, 2025 at 4:07 PM
Congratulations to new BME PhD graduate Brian Karlberg for successfully defending! Title: Cancer Molecular Subtyping: A Machine Learning Approach.
Congrats Dr. Karlberg!
Congrats Dr. Karlberg!
Colin, our B-BRITE Intern finished his summer internship in the Emili Lab. He gave a great poster presentation at the OHSU Summer Intern Poster Session. We wish him the best as he goes on to finish his undergrad education.
August 19, 2025 at 11:02 PM
Colin, our B-BRITE Intern finished his summer internship in the Emili Lab. He gave a great poster presentation at the OHSU Summer Intern Poster Session. We wish him the best as he goes on to finish his undergrad education.
BIG NEWS here at OHSU Knight Cancer Institute!
Phil and Penny Knight Donate $2 billion:
news.ohsu.edu/2025/08/14/o...
See the recording here: www.youtube.com/live/BYRbut4...
Phil and Penny Knight Donate $2 billion:
news.ohsu.edu/2025/08/14/o...
See the recording here: www.youtube.com/live/BYRbut4...
OHSU Knight Cancer Institute receives record $2 billion commitment from Phil and Penny Knight
The largest single donation ever made to a U.S. university, college or academic health center will transform cancer care.
news.ohsu.edu
August 14, 2025 at 7:01 PM
BIG NEWS here at OHSU Knight Cancer Institute!
Phil and Penny Knight Donate $2 billion:
news.ohsu.edu/2025/08/14/o...
See the recording here: www.youtube.com/live/BYRbut4...
Phil and Penny Knight Donate $2 billion:
news.ohsu.edu/2025/08/14/o...
See the recording here: www.youtube.com/live/BYRbut4...
A great Industry Outreach Workshop with Presenters Ms. Ronlov and Dr. Marchand. They gave valuable resources and insights to strategically reach out to industry.
Most importantly, they provided us with all the resources available to us here at OHSU.
Most importantly, they provided us with all the resources available to us here at OHSU.
August 13, 2025 at 11:23 PM
A great Industry Outreach Workshop with Presenters Ms. Ronlov and Dr. Marchand. They gave valuable resources and insights to strategically reach out to industry.
Most importantly, they provided us with all the resources available to us here at OHSU.
Most importantly, they provided us with all the resources available to us here at OHSU.
Andrew will be presenting at the upcoming 13th Symposium on Structural Proteomics!
July 25, 2025 at 3:56 PM
Andrew will be presenting at the upcoming 13th Symposium on Structural Proteomics!
The PREVAIL Team had a successful meeting presenting their project to NIH DCP and DCB representatives. As experts in their respective fields, their work will synergize to intercept cancer.
July 24, 2025 at 2:51 PM
The PREVAIL Team had a successful meeting presenting their project to NIH DCP and DCB representatives. As experts in their respective fields, their work will synergize to intercept cancer.
Saman and Nima both showcased their research at the Cascadia Proteomics Symposium. Saman presented a poster on his ongoing research in the Emili Lab.
July 21, 2025 at 3:45 PM
Saman and Nima both showcased their research at the Cascadia Proteomics Symposium. Saman presented a poster on his ongoing research in the Emili Lab.
PostDoc Nima Ranjbar Sistani in the Lab presented his ongoing research at the Cascadia Proteomics Symposium!
July 18, 2025 at 4:49 PM
PostDoc Nima Ranjbar Sistani in the Lab presented his ongoing research at the Cascadia Proteomics Symposium!
P01 PREVAIL BE/EAC Interception team prep!
July 8, 2025 at 8:32 PM
P01 PREVAIL BE/EAC Interception team prep!
Today we welcome Colin to the Emili Lab! Colin is an OHSU B-BRITE Intern and will be working with Jacob this Summer ☀️!
June 24, 2025 at 5:25 PM
Today we welcome Colin to the Emili Lab! Colin is an OHSU B-BRITE Intern and will be working with Jacob this Summer ☀️!
Congrats to newly minted BME graduate Dr. Jason Ware!
June 5, 2025 at 4:53 PM
Congrats to newly minted BME graduate Dr. Jason Ware!
An intimate, sunny, and warm lab potluck. Beautiful view from the Knight Cancer Research Building.
June 4, 2025 at 6:40 PM
An intimate, sunny, and warm lab potluck. Beautiful view from the Knight Cancer Research Building.
Grace P. presenting her OmNI tool paper to the Emili Lab - just as we ease into Summer session ☀️
May 21, 2025 at 9:45 PM
Grace P. presenting her OmNI tool paper to the Emili Lab - just as we ease into Summer session ☀️
Andrew presented at the PNNL Predictive Phenomics Conference "One Ring to Rule Them All". Andrew pictured here with Dr. Richard D. Smith (Former Battelle Fellow and Chief Scientist in the Biological Sciences Division at PNNL)
April 30, 2025 at 4:18 PM
Andrew presented at the PNNL Predictive Phenomics Conference "One Ring to Rule Them All". Andrew pictured here with Dr. Richard D. Smith (Former Battelle Fellow and Chief Scientist in the Biological Sciences Division at PNNL)
A fun and cloudy Lab Outing in Portland's International Rose Test Garden. A little early for the rose bloom. We enjoyed the outdoors. ⛅😀
April 22, 2025 at 5:53 PM
A fun and cloudy Lab Outing in Portland's International Rose Test Garden. A little early for the rose bloom. We enjoyed the outdoors. ⛅😀