Fabio Cortesi
@drfishvis.bsky.social
ARC Future Fellow|Marine Sensory Ecology Group University of Queensland| 🐠🐙🧠👀🧬| 🇨🇭🏔️—> 🇦🇺🌊
Reposted by Fabio Cortesi
We developed CrossFilt, a read-level, cross-species filtering approach that avoids these errors without sacrificing usable data. It outperforms all existing strategies and exposes just how much signal in comparative genomics has been misread.
doi.org/10.1101/2025...
doi.org/10.1101/2025...
CrossFilt: A Cross-species Filtering Tool that Eliminates Alignment Bias in Comparative Genomics Studies
Comparative functional genomic studies are often affected by biased read mapping across species due to inter-species differences in genome structure, sequence composition, and annotation quality. We d...
doi.org
June 7, 2025 at 12:07 AM
We developed CrossFilt, a read-level, cross-species filtering approach that avoids these errors without sacrificing usable data. It outperforms all existing strategies and exposes just how much signal in comparative genomics has been misread.
doi.org/10.1101/2025...
doi.org/10.1101/2025...
3/3 Once the larvae have hatched they enter a 10-14 day pelagic phase where they need to feed like crazy on various types of zooplankton (copepods, rotifers and brine shrimps in the lab) before they return to the reef, or in our case the pot, to settle and metamorphose into a mini #nemo
May 10, 2025 at 1:07 AM
3/3 Once the larvae have hatched they enter a 10-14 day pelagic phase where they need to feed like crazy on various types of zooplankton (copepods, rotifers and brine shrimps in the lab) before they return to the reef, or in our case the pot, to settle and metamorphose into a mini #nemo
2/n Once the eggs have been successfully fertilised, they will turn black after 2-3 days as the embryos begin to develop their black pigment in the skin.
After ~8-10 d the eyes start silvering up and the embryos will hatch shortly thereafter, this usually occurs at night. See next post for larvae
After ~8-10 d the eyes start silvering up and the embryos will hatch shortly thereafter, this usually occurs at night. See next post for larvae
May 10, 2025 at 1:04 AM
2/n Once the eggs have been successfully fertilised, they will turn black after 2-3 days as the embryos begin to develop their black pigment in the skin.
After ~8-10 d the eyes start silvering up and the embryos will hatch shortly thereafter, this usually occurs at night. See next post for larvae
After ~8-10 d the eyes start silvering up and the embryos will hatch shortly thereafter, this usually occurs at night. See next post for larvae
Nice, I call I the grey sky puzzle 🧩 challenge in my classes.
April 13, 2025 at 8:14 AM
Nice, I call I the grey sky puzzle 🧩 challenge in my classes.