Dominic Boutet
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dominic-boutet.bsky.social
Dominic Boutet
@dominic-boutet.bsky.social
PhD Student @IPNMcGill @TheNeuro_MNI | Comp Neuro/Neuroimaging/ML/AI | NSCI 200 TA @mcgillu | https://neurolife77.github.io/
It can run basic processing steps like band pass filtering, time freq stuff like hilbert/fft/wavelet/PAC, connectivity stuff like AEC/PLI/PLV, etc. It is packaged and available through pypi using "python -m pip install pystorm3". 3/3
January 30, 2025 at 12:57 PM
It does not handle interactions with Brainstorm or any database and mainly operates as a library of functions to perform operations on data (sensor signals and imaging kernel). It handles parcellation; just pass in the imaging kernel as a list of matrices grouped by parcel. 2/3
January 30, 2025 at 12:57 PM
It contains stuff like code for finding nullclines, finding & classifying fixed points (all with associated mathematical derivations), plotting a phase plane. It also has interactive phase plane plots to explore the behavior of the model around some point in the parameter space (e.g., image below).
January 27, 2025 at 6:53 PM