Diepold Lab
diepold-lab.bsky.social
Diepold Lab
@diepold-lab.bsky.social
Our group, the Department of Applied Biology at the Karlsruhe Institute of Technology, investigates bacterial secretion systems and virulence mechanisms to better understand their role in infection biology and engineer biotech and healthcare applications
What if even the core of bacterial nanomachines wasn’t static?

We found that the T3SS core protein SctD in Yersinia dynamically exchanges subunits — and this flexibility is essential for proper assembly & function.

🔗 www.nature.com/articles/s41...

@kit.edu @t3sss.bsky.social
November 12, 2025 at 4:21 PM
Reposted by Diepold Lab
Special thanks 🙏 go to first author @ljmihajlovic.bsky.social , as well as Lara Hofacker, Florian Lindner, Priyanikha Jayakumar, and collaborator @diepold-lab.bsky.social !
November 11, 2025 at 5:24 PM
T3SS activity comes at a cost—bacteria that use the system pay with reduced growth. We found how Yersinia balance costs and benefits: at higher densities, they actively suppress T3SS activity and adhesion, switching from colonization to replication and dissemination.
doi.org/10.1371/jour...
@kit.edu
Yersinia actively downregulates type III secretion and adhesion at higher cell densities
Author summary Bacteria can use the type III secretion system (T3SS), a molecular syringe-like device, to manipulate host cells by injecting effector proteins. Yersinia enterocolitica, a pathogenic ba...
doi.org
September 2, 2025 at 8:34 PM
We recently described how T3SS effectors reach the injectisome with a shuttle system. But what about their chaperones? With live microscopy, proximity labeling and functional assays, @keithpint.bsky.social showed the Yersinia chaperone SycH already hands over its cargo in the cytosol. bit.ly/47hq6rM
August 27, 2025 at 9:22 AM
This is the first of three manuscripts we’ve recently had accepted — more to come soon! 🚀
#Microbiology #InfectionBiology #SingleCell
August 20, 2025 at 2:47 PM
Using live-cell microscopy, we uncovered distinct bacterial subpopulations that primarily use certain combinations of these nanomachines:
• some prioritize motility & T3SS
• others shift to T6SS for antagonism
All tuned by the usual suspect: cyclic di-GMP.
August 20, 2025 at 2:46 PM
Our first accepted manuscript at my new lab (@kitkarlsruhe) is out in Communications Biology! 🎉
We show how Pseudomonas aeruginosa coordinates its virulence systems, T3SS, H1-T6SS, flagellum, at single-cell resolution.
🔗 www.nature.com/articles/s42...
@t3sss.bsky.social @NaturePortfolio.bsky.social
August 20, 2025 at 2:43 PM
Reposted by Diepold Lab
🛠️Toolbox 🛠️ out to modulate gene expression & protein secretion in a predatory bacterium.
📑Preprint from my group below.
Many thanks to L. Mihajlovic @ljmihajlovic.bsky.social, L. Hofacker, F. Lindner, P. Jayakumar & A. Diepold @diepold-lab.bsky.social! #MicroSky #SyntheticBiology #PredatoryBacteria
May 19, 2025 at 5:37 AM
New preprint:
Virulence does not come for free - activity of the T3SS stops bacterial growth.
We show that in Y. enterocolitica, activating secretion triggers major DNA rearrangements.
Could this be the key to secretion-associated growth inhibition?
Read more here: www.biorxiv.org/content/10.1...
Activation of the Yersinia type III secretion system induces large-scale chromosomal and virulence plasmid DNA rearrangements
The type III secretion system (T3SS) is used by Gram-negative bacteria, including important pathogens, to manipulate eukaryotic target cells by injecting effector proteins. Type III secretion and bact...
www.biorxiv.org
February 5, 2025 at 9:33 AM
Hello world, our lab investigates bacterial secretion systems and virulence mechanisms to better understand their role in infection biology, and their application in biotech and healthcare.
Since October 2024, we are the Department of Applied Biology at the KIT
@kitkarlsruhe.bsky.social
December 30, 2024 at 9:48 AM