Cornelius Schröder
@coschroeder.bsky.social
velotest: finally on bioRxiv!
check out our work on faithfulness of RNA velocity embeddings and apply it to your own data:
github.com/mackelab/vel...
work lead by @sbischoff.bsky.social
check out our work on faithfulness of RNA velocity embeddings and apply it to your own data:
github.com/mackelab/vel...
work lead by @sbischoff.bsky.social
velotest: Statistical assessment of RNA velocity embeddings reveals quality differences for reliable trajectory visualizations https://www.biorxiv.org/content/10.1101/2025.10.26.683064v1
October 28, 2025 at 9:33 AM
velotest: finally on bioRxiv!
check out our work on faithfulness of RNA velocity embeddings and apply it to your own data:
github.com/mackelab/vel...
work lead by @sbischoff.bsky.social
check out our work on faithfulness of RNA velocity embeddings and apply it to your own data:
github.com/mackelab/vel...
work lead by @sbischoff.bsky.social
Reposted by Cornelius Schröder
From hackathon to release: sbi v0.25 is here! 🎉
What happens when dozens of SBI researchers and practitioners collaborate for a week? New inference methods, new documentation, lots of new embedding networks, a bridge to pyro and a bridge between flow matching and score-based methods 🤯
1/7 🧵
What happens when dozens of SBI researchers and practitioners collaborate for a week? New inference methods, new documentation, lots of new embedding networks, a bridge to pyro and a bridge between flow matching and score-based methods 🤯
1/7 🧵
September 9, 2025 at 3:00 PM
From hackathon to release: sbi v0.25 is here! 🎉
What happens when dozens of SBI researchers and practitioners collaborate for a week? New inference methods, new documentation, lots of new embedding networks, a bridge to pyro and a bridge between flow matching and score-based methods 🤯
1/7 🧵
What happens when dozens of SBI researchers and practitioners collaborate for a week? New inference methods, new documentation, lots of new embedding networks, a bridge to pyro and a bridge between flow matching and score-based methods 🤯
1/7 🧵
Reposted by Cornelius Schröder
We spent a year writing this review of low-dim embeddings and arguing about things like epistemic roles and best practices :-) 20+ authors are all participants of the Dagstuhl seminar we held last year: www.dagstuhl.de/24122. Led by @alexandr.bsky.social and Cyril de Bodt.
arxiv.org/abs/2508.15929
arxiv.org/abs/2508.15929
August 27, 2025 at 3:14 PM
We spent a year writing this review of low-dim embeddings and arguing about things like epistemic roles and best practices :-) 20+ authors are all participants of the Dagstuhl seminar we held last year: www.dagstuhl.de/24122. Led by @alexandr.bsky.social and Cyril de Bodt.
arxiv.org/abs/2508.15929
arxiv.org/abs/2508.15929
Reposted by Cornelius Schröder
New preprint: SBI with foundation models!
Tired of training or tuning your inference network, or waiting for your simulations to finish? Our method NPE-PF can help: It provides training-free simulation-based inference, achieving competitive performance with orders of magnitude fewer simulations! ⚡️
Tired of training or tuning your inference network, or waiting for your simulations to finish? Our method NPE-PF can help: It provides training-free simulation-based inference, achieving competitive performance with orders of magnitude fewer simulations! ⚡️
July 23, 2025 at 2:28 PM
New preprint: SBI with foundation models!
Tired of training or tuning your inference network, or waiting for your simulations to finish? Our method NPE-PF can help: It provides training-free simulation-based inference, achieving competitive performance with orders of magnitude fewer simulations! ⚡️
Tired of training or tuning your inference network, or waiting for your simulations to finish? Our method NPE-PF can help: It provides training-free simulation-based inference, achieving competitive performance with orders of magnitude fewer simulations! ⚡️
Reposted by Cornelius Schröder
We're super happy: Our Cluster of Excellence will continue to receive funding from the German Research Foundation @dfg.de ! Here’s to 7 more years of exciting research at the intersection of #machinelearning and science! Find out more: uni-tuebingen.de/en/research/... #ExcellenceStrategy
May 22, 2025 at 4:24 PM
We're super happy: Our Cluster of Excellence will continue to receive funding from the German Research Foundation @dfg.de ! Here’s to 7 more years of exciting research at the intersection of #machinelearning and science! Find out more: uni-tuebingen.de/en/research/... #ExcellenceStrategy
Reposted by Cornelius Schröder
Great news! Our March SBI hackathon in Tübingen was a huge success, with 40+ participants (30 onsite!). Expect significant updates soon: awesome new features & a revamped documentation you'll love! Huge thanks to our amazing SBI community! Release details coming soon. 🥁 🎉
May 12, 2025 at 2:29 PM
Great news! Our March SBI hackathon in Tübingen was a huge success, with 40+ participants (30 onsite!). Expect significant updates soon: awesome new features & a revamped documentation you'll love! Huge thanks to our amazing SBI community! Release details coming soon. 🥁 🎉
Happy to see this finally out!
My collaboration with @pirta-palola.bsky.social started at the ProbAI summer school in Trondheim and is a great example what can happen if you meet smart people with different backgrounds and spend a whole week together discussing science, coding and having fun!
My collaboration with @pirta-palola.bsky.social started at the ProbAI summer school in Trondheim and is a great example what can happen if you meet smart people with different backgrounds and spend a whole week together discussing science, coding and having fun!
Happy to share that my second PhD chapter has been published: royalsocietypublishing.org/doi/10.1098/...
Thank you to all my co-authors! @coschroeder.bsky.social
@ymalhi.bsky.social @oxfordgeography.bsky.social @plymouthmarine.bsky.social @tuebingen-ai.bsky.social @noc.ac.uk @ephe-psl.bsky.social
Thank you to all my co-authors! @coschroeder.bsky.social
@ymalhi.bsky.social @oxfordgeography.bsky.social @plymouthmarine.bsky.social @tuebingen-ai.bsky.social @noc.ac.uk @ephe-psl.bsky.social
May 12, 2025 at 10:43 AM
Happy to see this finally out!
My collaboration with @pirta-palola.bsky.social started at the ProbAI summer school in Trondheim and is a great example what can happen if you meet smart people with different backgrounds and spend a whole week together discussing science, coding and having fun!
My collaboration with @pirta-palola.bsky.social started at the ProbAI summer school in Trondheim and is a great example what can happen if you meet smart people with different backgrounds and spend a whole week together discussing science, coding and having fun!
Reposted by Cornelius Schröder
🥳Great news, our JOSS paper "sbi reloaded" has been accepted! 🎉
This community lead by the fine folks of @sbi-devs.bsky.social is very welcoming and super fun to work with! I learn with every discussion I have.
paper: joss.theoj.org/papers/10.21...
review: github.com/openjournals...
This community lead by the fine folks of @sbi-devs.bsky.social is very welcoming and super fun to work with! I learn with every discussion I have.
paper: joss.theoj.org/papers/10.21...
review: github.com/openjournals...
[REVIEW]: sbi reloaded: a toolkit for simulation-based inference workflows · Issue #7754 · openjournals/joss-reviews
Submitting author: @janfb (Jan Boelts) Repository: https://github.com/sbi-dev/sbi Branch with paper.md (empty if default branch): joss-submission-2024 Version: v0.24.0 Editor: @boisgera Reviewers: ...
github.com
April 11, 2025 at 7:16 AM
🥳Great news, our JOSS paper "sbi reloaded" has been accepted! 🎉
This community lead by the fine folks of @sbi-devs.bsky.social is very welcoming and super fun to work with! I learn with every discussion I have.
paper: joss.theoj.org/papers/10.21...
review: github.com/openjournals...
This community lead by the fine folks of @sbi-devs.bsky.social is very welcoming and super fun to work with! I learn with every discussion I have.
paper: joss.theoj.org/papers/10.21...
review: github.com/openjournals...