Connor McShaffrey
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cmcshaff.bsky.social
Connor McShaffrey
@cmcshaff.bsky.social
CogSci / Bioengineering PhD Candidate, NSF Graduate Research Fellow (he/him)

https://sites.google.com/view/connor-mcshaffrey/bio

Indiana University, Vassar '21 🎓

Modeling life and its limits with dynamical systems 🦠 microscopy for fun 🔬
Where does the life-death boundary come from, and how will a cell's dynamics unfold relative to it? Myself, Eran Agmon, and Randy Beer argue for a theory of cellular viability, with new global organizing principles for cell fate.

Preprint: arxiv.org/pdf/2511.07847
November 12, 2025 at 6:36 PM
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August 27, 2025 at 1:38 AM
A shot I got manipulating the light passing through a soil sample at 250x magnification 🙂
January 15, 2025 at 5:25 PM
As I watched a small patch of snow melt on my microscope slide, I was able to manipulate the light to get some really beautiful structure. Editing the colors and overlaying some effects gave this picture, which I'm quite happy with 🙂
January 8, 2025 at 7:47 PM
Some debris from plants and cells found in a water sample, made to look like they're in outer space
January 2, 2025 at 8:51 PM
Spider plant leaf, post processing to improve contrast 🙂
December 31, 2024 at 4:23 PM
Rearranged the house, so it only feels right to pick a new selection of books to go behind the desk 🙂
November 29, 2024 at 3:38 AM
It was an honor to get to present Viability Space Decomposition at the Theoretical and Experimental Approaches to Goal-Directed Behavior Workshop at BCAM in Bilbao. It was amazing to hear multiple people discuss how to tackle the viability of living systems. I feel inspired.
October 23, 2024 at 6:23 PM
Day 4 of 7 for no context black and white photos from my life, challenged by @smellosopher.bsky.social. I'm quite fond of this one.
October 15, 2023 at 11:00 PM
Day 3 of 7 for the no context black and white photos challenge.
October 14, 2023 at 11:46 PM
Day 2 of 7 🙂
October 14, 2023 at 1:40 AM
@smellosopher.bsky.social challenged me to do the challenge for 7 days, 7 black and white photos with no humans or explanations. Here's day 1. I can't think of who I should challenge, so I'll leave it as an open invitation 🙂
October 12, 2023 at 3:39 PM
Was purging my digital files when I came across the ending note of an undergrad paper... I had forgotten I was doing all of this because of a caffeine-dependency fueled vendetta
September 23, 2023 at 2:55 PM
This afternoon I recreated one of my favorite output spaces for a 2N continuous time recurrent neural network 🙂 magenta and cyan are nullclines. Blue dots are stable equilibria, red are unstable, and green are saddle nodes. Blue and red branches are saddle manifolds and carve the basins
September 11, 2023 at 10:05 PM