Claudia Carter
@claudia-evelyn.bsky.social
Early Career Bioinformatician · University of Bath MSc on placement at the Wellcome Sanger Institute · Interested in all things omics 👩💻 with a soft spot for (epi)trancriptomics
Reposted by Claudia Carter
Amazing work from our colleagues in Sierra Leone, Nigeria, and elsewhere, making the first sequences available from the ongoing Mpox epidemic in Sierra Leone.
More to come - for now, head over to @pathoplexus.org:
pathoplexus.org/seqsets/PP_S...
More to come - for now, head over to @pathoplexus.org:
pathoplexus.org/seqsets/PP_S...
Pathoplexus | SeqSets
Pathoplexus is a new, open-source database dedicated to the efficient sharing of human viral pathogen genomic data, fostering global collaboration and public health response.
pathoplexus.org
May 27, 2025 at 8:28 PM
Amazing work from our colleagues in Sierra Leone, Nigeria, and elsewhere, making the first sequences available from the ongoing Mpox epidemic in Sierra Leone.
More to come - for now, head over to @pathoplexus.org:
pathoplexus.org/seqsets/PP_S...
More to come - for now, head over to @pathoplexus.org:
pathoplexus.org/seqsets/PP_S...
Engaging first day at #ABPHM 2025 including a fascinating panel on equity in pathogen genomics which was broken down into the themes of language barriers, supply chain issues and limited access to professional networks for the global south
May 21, 2025 at 5:44 PM
Engaging first day at #ABPHM 2025 including a fascinating panel on equity in pathogen genomics which was broken down into the themes of language barriers, supply chain issues and limited access to professional networks for the global south
Reposted by Claudia Carter
Evaluation of Oxford Nanopore Technologies workflows for genomic epidemiology of outbreak-associated bacterial isolates in the clinical setting https://www.medrxiv.org/content/10.1101/2025.04.25.25326448v1
April 29, 2025 at 5:42 AM
Evaluation of Oxford Nanopore Technologies workflows for genomic epidemiology of outbreak-associated bacterial isolates in the clinical setting https://www.medrxiv.org/content/10.1101/2025.04.25.25326448v1
Reposted by Claudia Carter
Do you (like me) create a bunch of conda environments, then later forget what they're for, when they were last updated, or which tools are in them?
If so, you might this little project: github.com/rrwick/conda...
If so, you might this little project: github.com/rrwick/conda...
GitHub - rrwick/condaenvlist: a simple tool for listing conda environments with descriptions
a simple tool for listing conda environments with descriptions - rrwick/condaenvlist
github.com
March 27, 2025 at 4:34 AM
Do you (like me) create a bunch of conda environments, then later forget what they're for, when they were last updated, or which tools are in them?
If so, you might this little project: github.com/rrwick/conda...
If so, you might this little project: github.com/rrwick/conda...
Reposted by Claudia Carter
Another fabulous talk in the 'Exploring Hidden Threats: Knowledge Expansion of Understudied Bacterial Pathogens' session from @amberbarton.bsky.social highlighting the challenges on working on non-culturable organisms 👀🦠🧬
@sangerinstitute.bsky.social
#MicrobialGenomics #Microbio25 #MicroSky
@sangerinstitute.bsky.social
#MicrobialGenomics #Microbio25 #MicroSky
April 1, 2025 at 3:27 PM
Another fabulous talk in the 'Exploring Hidden Threats: Knowledge Expansion of Understudied Bacterial Pathogens' session from @amberbarton.bsky.social highlighting the challenges on working on non-culturable organisms 👀🦠🧬
@sangerinstitute.bsky.social
#MicrobialGenomics #Microbio25 #MicroSky
@sangerinstitute.bsky.social
#MicrobialGenomics #Microbio25 #MicroSky
Reposted by Claudia Carter
🦠 Are you sharing, or using pathogen data? Take the Pathogen Data Network's short 10-question survey!
👉 www.surveymonkey.com/r/pdn-stakeh...
Results will help shape educational initiatives and will inform the development of tools and services offered by the network.
👉 www.surveymonkey.com/r/pdn-stakeh...
Results will help shape educational initiatives and will inform the development of tools and services offered by the network.
February 25, 2025 at 9:32 AM
🦠 Are you sharing, or using pathogen data? Take the Pathogen Data Network's short 10-question survey!
👉 www.surveymonkey.com/r/pdn-stakeh...
Results will help shape educational initiatives and will inform the development of tools and services offered by the network.
👉 www.surveymonkey.com/r/pdn-stakeh...
Results will help shape educational initiatives and will inform the development of tools and services offered by the network.
bioinformaticians- how are we describing this career to friends and family that have backgrounds in neither bio nor computers? #bioinfo #bioinformatics
January 27, 2025 at 4:49 PM
bioinformaticians- how are we describing this career to friends and family that have backgrounds in neither bio nor computers? #bioinfo #bioinformatics
Reposted by Claudia Carter
Nucleotide-resolution Mapping of RNA N6-Methyladenosine (m6A) modifications and comprehensive analysis of global polyadenylation events in mRNA 3' end processing in malaria pathogen Plasmodium falciparum https://www.biorxiv.org/content/10.1101/2025.01.07.631827v1
January 8, 2025 at 9:32 AM
Nucleotide-resolution Mapping of RNA N6-Methyladenosine (m6A) modifications and comprehensive analysis of global polyadenylation events in mRNA 3' end processing in malaria pathogen Plasmodium falciparum https://www.biorxiv.org/content/10.1101/2025.01.07.631827v1
Great to celebrate the Institute at Sanger Day last week 🧬 Particularly enjoyed the Global Working: Challenges and opportunities panel discussing geopolitical aspects of partnerships, logistics (suitcase of reagents missing in transit!) and the importance of mutually beneficial partnerships
December 16, 2024 at 12:37 PM
Great to celebrate the Institute at Sanger Day last week 🧬 Particularly enjoyed the Global Working: Challenges and opportunities panel discussing geopolitical aspects of partnerships, logistics (suitcase of reagents missing in transit!) and the importance of mutually beneficial partnerships