Fangyuan (Chelsea) Chen, MD
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chelseachenmd.bsky.social
Fangyuan (Chelsea) Chen, MD
@chelseachenmd.bsky.social
Postdoctoral Research Fellow @DanaFarber, #Bioinformatics #PrecisionMed #Oncology
Honored to contribute alongside such an inspiring team @ZheqiL @LiChen @JiebinLiu (and others). Grateful to our wonderful mentors @Adrianvlee @oesterreichs for the their guidance, and collaborators @GertzLab @mjsikora @JCarrollLab @LabPolyak (and many) for their suggestions and contributions!
December 19, 2024 at 3:08 PM
Besides visualization of original datasets, the browser (lnkd.in/dxMNMSDE) also enables cross-dataset signature score calculation of user-defined gene sets (lnkd.in/dTrMnFVX; Analysis Mode 2), (co)expression pattern visualization of user-selected single genes (lnkd.in/dSwEgwaM; Analysis Mode 3)
LinkedIn
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lnkd.in
December 19, 2024 at 3:08 PM
The current upgrade of EstroGene2.0 (shorturl.at/WPiJK) curated and analyzed breast cancer cell line data under endocrine therapy, and the endocrine resistance models, including transcriptomics, ChIP-seq, and ER RIME datasets from 361 experiments in 212 studies across 28 cell lines.
The EstroGene2.0 database for endocrine therapy response and resistance in breast cancer - npj Breast Cancer
npj Breast Cancer - The EstroGene2.0 database for endocrine therapy response and resistance in breast cancer
shorturl.at
December 19, 2024 at 3:07 PM
In EstroGene1.0 (estrogene.org), we focused on E2-triggered ER activation in breast cancer cell lines from 246 experiments including 136 transcriptomic, cistromic, and epigenetic datasets. Learn more lnkd.in/dxNfZM-s
E2 Database
An interactive online platform for E2 database query visualization
estrogene.org
December 19, 2024 at 3:06 PM