Caitlin Guccione
@cgucci.bsky.social
PhD Canidate @ UC San Diego in QCC and Knight Labs
Reposted by Caitlin Guccione
How do microbial communities assemble during precancer and cancer evolution? Excited to share our new preprint on modeling of microbial evolution in Barrett's esophagus and esophageal adenocarcinoma! 🦠 Led by PhD student Caitlin Guccione #barretts #mathonco more in 🧵
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
www.biorxiv.org
January 17, 2025 at 4:14 PM
How do microbial communities assemble during precancer and cancer evolution? Excited to share our new preprint on modeling of microbial evolution in Barrett's esophagus and esophageal adenocarcinoma! 🦠 Led by PhD student Caitlin Guccione #barretts #mathonco more in 🧵
www.biorxiv.org/content/10.1...
www.biorxiv.org/content/10.1...
Reposted by Caitlin Guccione
Our work on filtering host DNA from WGS data is also out today in @naturecomms.bsky.social! Congrats to first authors Caitlin Guccione and Lucas Patel - their methods were used in our new preprint and are freely available to use on your own data 🧬
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data - Nature Communications
Here, the authors apply novel pangenome indexes created from diverse human references to facilitate computationally efficient removal of host genetic information, preserving biological accuracy and pr...
www.nature.com
January 18, 2025 at 4:58 PM
Our work on filtering host DNA from WGS data is also out today in @naturecomms.bsky.social! Congrats to first authors Caitlin Guccione and Lucas Patel - their methods were used in our new preprint and are freely available to use on your own data 🧬
www.nature.com/articles/s41...
www.nature.com/articles/s41...