Roberto Cerbino
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cerbino.bsky.social
Roberto Cerbino
@cerbino.bsky.social
Soft matter and biophysics @univie.ac.at. Born in Italy. Welcomed by Austria. On Bluesky to find another Twitter now that Twitter is no more.
Thank you Conrad! Your opinion and feedback is very much appreciated!
October 31, 2025 at 6:01 PM
We hope this guide will make DDM as common as DLS in soft-matter and biological labs.

Give it a try, share your results, and let’s make DDM part of every microscope’s toolkit!

Link to the paper:
pubs.aip.org/aip/jcp/arti...
The Hitchhiker’s guide to differential dynamic microscopy
Over nearly two decades, differential dynamic microscopy (DDM) has become a standard technique for extracting dynamic correlation functions from time-lapse micr
pubs.aip.org
October 28, 2025 at 3:28 PM
fastDDM comes with tutorial on using DDM to study:

- Colloidal suspensions
- Bacteria and active swimmers
- Microrheology of complex fluids
- Cells and tissues

The tutorial includes examples and notebooks for all of these.
October 28, 2025 at 3:28 PM
We also introduce fastDDM — a new, open-source, high-performance implementation that makes DDM thousands of times faster and easy to use on large datasets.

🧰 Free, transparent, and ready for your next project.
October 28, 2025 at 3:28 PM
We walk you through the complete pipeline ⬇️

🎥 Video acquisition → ⚡ Fourier analysis → 📊 Fitting → 🔍 Physical parameters

The same logic works for bright-field, phase-contrast, fluorescence microscopy, and beyond…
October 28, 2025 at 3:28 PM
DDM lets you turn any microscopy video into a scattering experiment, revealing the dynamics of colloids, proteins, liquid crystals, foams, emulsions, cells, bacteria, or active matter directly from image sequences.

It’s like DLS, but with a microscope and a movie.
October 28, 2025 at 3:28 PM
thanks for the detailed explanation. now I understand the meaning of wrong in this context. and I find it an interesting problem. I look forward to reading the full paper!
July 9, 2025 at 8:40 PM
And I forgot a very important thing. This project was conducted at @univie-physik.bsky.social and made possible by funding from @fwf-at.bsky.social
July 9, 2025 at 6:06 AM
Interesting paper! Can you elaborate on what you mean by wrong?
July 9, 2025 at 6:01 AM
7/ 👩‍🔬 Whether you’re a soft matter physicist, biophysicist, or microscopy enthusiast—if you’re looking to measure dynamics without tracking, this guide is for you.

🧵 Read it, and use it!

💡 And reach out with feedback—fastDDM is community-driven!

📄 arxiv.org/abs/2507.05058
The Hitchhiker's Guide to Differential Dynamic Microscopy
Over nearly two decades, Differential Dynamic Microscopy (DDM) has become a standard technique for extracting dynamic correlation functions from time-lapse microscopy data, with applications spanning ...
arxiv.org
July 8, 2025 at 8:34 AM
6/ 🧪 What can you do with this tutorial?
We guide you through:
✅ Particle sizing
✅ Merging fast & slow acquisitions
✅ Handling 2D vs. 3D dynamics
✅ Detecting axial drift & sedimentation
✅ Quantifying uncertainty
✅ Using image windowing
✅ Optimizing experimental design
…and more!
July 8, 2025 at 8:34 AM
5/ 📊 Reproducibility first!
Each section is paired with Jupyter notebooks using real datasets.
🔄 You can follow every step, run the code, and adapt it to your system.
✅ Educational
✅ Extensible
✅ Transparent
July 8, 2025 at 8:34 AM
4/ ⚙️ fastDDM
We introduce fastDDM—an open-source, high-performance Python package that speeds up DDM analysis by up to 4 orders of magnitude.
GPU + FFT + smart averaging = minutes instead of hours.

🔗 GitHub: github.com/somexlab/fas...
🔗 GitHub: github.com/somexlab/fas...
GitHub - somexlab/fastddm: Python library for Differential Dynamic Microscopy analysis
Python library for Differential Dynamic Microscopy analysis - somexlab/fastddm
github.com
July 8, 2025 at 8:34 AM
3/ 🎓 This is a comprehensive tutorial, not just a method paper.
We cover:
✔️ Physics of DDM
✔️ Mathematical foundations
✔️ Image formation
✔️ Practical data analysis
✔️ Common pitfalls
✔️ Real datasets & examples
July 8, 2025 at 8:34 AM
2/ 🔍 What is DDM?
DDM analyzes time-lapse microscopy videos to extract dynamical information—without tracking particles. Think DLS + imaging.
✅ Works in bright-field, fluorescence, phase contrast, and more
✅ Resolves dynamics in space and time
July 8, 2025 at 8:34 AM