Santiago Carmona 🧬 🖥️ 🧑🏾🔬
@carmonation.bsky.social
Computational biologist, associate professor at University of Geneva, Department of Pathology and Immunology. Single-cell omics, bio data science, immunology & cancer research
Visualising the impact of wounding on cancer cells and the tumor microenvironment at single-cell resolution in situ!
Happy to share updated paper with new spatial transcriptomics of human skin tumors using CosMx 6'000-gene panel. All data and code are available.
www.biorxiv.org/content/10.1...
Happy to share updated paper with new spatial transcriptomics of human skin tumors using CosMx 6'000-gene panel. All data and code are available.
www.biorxiv.org/content/10.1...
February 24, 2025 at 3:34 PM
Visualising the impact of wounding on cancer cells and the tumor microenvironment at single-cell resolution in situ!
Happy to share updated paper with new spatial transcriptomics of human skin tumors using CosMx 6'000-gene panel. All data and code are available.
www.biorxiv.org/content/10.1...
Happy to share updated paper with new spatial transcriptomics of human skin tumors using CosMx 6'000-gene panel. All data and code are available.
www.biorxiv.org/content/10.1...
In case this is useful/interesting for others, I've posted the slides of recent mini-review for biology PhD students on “What is a cell type? conceptual and operational definitions in the single-cell omics era”
Suggested corrections and additional refs welcome!
doi.org/10.6084/m9.f...
Suggested corrections and additional refs welcome!
doi.org/10.6084/m9.f...
December 21, 2024 at 12:45 PM
In case this is useful/interesting for others, I've posted the slides of recent mini-review for biology PhD students on “What is a cell type? conceptual and operational definitions in the single-cell omics era”
Suggested corrections and additional refs welcome!
doi.org/10.6084/m9.f...
Suggested corrections and additional refs welcome!
doi.org/10.6084/m9.f...
Sub-cellular Imaging of the Entire Protein-Coding Human Transcriptome (18933-plex) on FFPE Tissue Using Spatial Molecular Imaging
www.biorxiv.org/content/10.1...
With clear explanation of how this amazing technology achieves RNA (ISH) probe decoding at Hamming Distance of 4
www.biorxiv.org/content/10.1...
With clear explanation of how this amazing technology achieves RNA (ISH) probe decoding at Hamming Distance of 4
December 6, 2024 at 11:28 AM
Sub-cellular Imaging of the Entire Protein-Coding Human Transcriptome (18933-plex) on FFPE Tissue Using Spatial Molecular Imaging
www.biorxiv.org/content/10.1...
With clear explanation of how this amazing technology achieves RNA (ISH) probe decoding at Hamming Distance of 4
www.biorxiv.org/content/10.1...
With clear explanation of how this amazing technology achieves RNA (ISH) probe decoding at Hamming Distance of 4
🚨 Last days to apply!
Open PhD position in Computational Systems Immunology in Lausanne, Switzerland
Interested in immunology, machine learning, single-cell perturbation data?
Great opportunity to contribute to enhancing cancer T cell therapies.
career5.successfactors.eu/career?caree...
Open PhD position in Computational Systems Immunology in Lausanne, Switzerland
Interested in immunology, machine learning, single-cell perturbation data?
Great opportunity to contribute to enhancing cancer T cell therapies.
career5.successfactors.eu/career?caree...
November 14, 2024 at 8:48 AM
🚨 Last days to apply!
Open PhD position in Computational Systems Immunology in Lausanne, Switzerland
Interested in immunology, machine learning, single-cell perturbation data?
Great opportunity to contribute to enhancing cancer T cell therapies.
career5.successfactors.eu/career?caree...
Open PhD position in Computational Systems Immunology in Lausanne, Switzerland
Interested in immunology, machine learning, single-cell perturbation data?
Great opportunity to contribute to enhancing cancer T cell therapies.
career5.successfactors.eu/career?caree...