Cade Mirchandani
cademirch.bsky.social
Cade Mirchandani
@cademirch.bsky.social
bioinformatics phd candidate @ ucsc

https://github.com/cademirch
snkmt provides a clean terminal ui built with #textual, meaning you can use it on servers. Some key features:

- View all workflows, and their progress
- Per-rule progress for selected workflow
- View failed job log files for quick debugging 2/3
June 3, 2025 at 2:52 PM
Excited to share the #Snakemake monitoring tool I've been working on:
snkmt (Snakemate) - a CLI utility for real-time workflow monitoring. Basically solves the "is my pipeline still running?" problem and makes debugging failed jobs much easier.
#bioinformatics #workflow #opensource 1/3
June 3, 2025 at 2:52 PM