Adrian Bunzel
bunzela.bsky.social
Adrian Bunzel
@bunzela.bsky.social
Creating enzymes by computational design and directed evolution.

Group Leader at MPI for Terrestrial Microbiology, Germany
https://www.mpi-marburg.mpg.de/home

#FascinatedByEnzymes
How does AI.zymes work?

AI.zymes combines the best of🛠️#Rosetta,🧠#ProteinMPNN,🔮#ESMFold, and⚡#FieldTools in rounds of design and selection.

Unlike other enzyme design algorithms, AI.zymes can directly target biocatalytic properties — not just folding or stability.

2/🧵
April 30, 2025 at 5:35 PM
🚨Out now in Angewandte Chemie:

AI.zymes - A modular platform for evolutionary enzyme design.

AI.zymes integrates established and emerging bioengineering tools into a coherent pipeline for #enzymedesign.

📄Paper: doi.org/10.1002/anie...
💻GitHub: github.com/bunzela/AIzy...
April 30, 2025 at 5:35 PM
🚨 Don’t miss your chance to apply for the 3 open PhD positions in our group!
🌞 Project I : #computationaldesign of #photoenzymes for solar-driven nitrogen reduction to ammonia.
🧪 Apply now! Screening starts April 1
🔗 mpg.de/24336572/phd...
@mpimicrobiomarburg.bsky.social @maxplanck.de
March 25, 2025 at 8:52 AM
What’s next? What enzyme would YOU like to design? AI.zymes is ready to tackle new challenges with its modular, expandable framework.

Reach out to adrian.bunzel@bsse.ethz.ch to use AI.zymes to improve your favorite enzyme!🌍💬

5/🧵
February 12, 2025 at 7:01 PM
Experimental validation:
✅7.7x higher activity after evolutionary design.
✅thermostable and monomeric.
✅only 7 variants tested—a remarkable success rate!

4/🧵
February 12, 2025 at 7:01 PM
Designing electrostatic catalysis has been a long-standing challenge—until now.⚡

AI.zymes improves electrostatic catalysis NOT through design algorithms aimed at electrostatics - BUT by evolutionary selection to enrich stable proteins with beneficial electrostatics.💡

3/🧵
February 12, 2025 at 7:01 PM
What is AI.zymes?🤔 Using evolutionary design, AI.zymes combines the best of🛠️ #Rosetta🧬#ProteinMPNN🔍 #ESMFold and⚡ #FieldTools.

Unlike other algorithms, AI.zymes specifically optimizes biocatalytic properties.

And it’s highly modular, ready to expand as new tools emerge!

2/🧵
February 12, 2025 at 7:01 PM
🚨Preprint Alert!🚨

#ProteinDesign is advancing rapidly—wouldn't it be great to seamlessly combine design tools to achieve more than what each can do alone?🤔

Here, we introduce AI.zymes: A modular platform for evolutionary #EnzymeDesign.♻️🖥️

biorxiv.org/content/10.1...
1/🧵
February 12, 2025 at 7:01 PM