BioVoxxel (Jan Brocher)
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biovoxxel.de
BioVoxxel (Jan Brocher)
@biovoxxel.de
BioImage Analyst, Consulting, Customized Analysis Programming Founder, PhD in biology, Fiji/ImageJ, Inkscape, Java
🧪🔬💻
🇩🇪 🇬🇧 🇪🇦

Homepage: biovoxxel.de
All relevant BioVoxxel Links: linktr.ee/biovoxxel
LinkedIn Newsletter: http://bit.ly/46mYBL7
If you ever heard handpan music, you might have been enchanted by its mesmerizing sound.
This is in danger and the handpan might become an "illegal" instrument (if sth. like that ever existed).

Please watch the info video and if you feel like and can, help to protect it!

youtu.be/6fISj2t0GA8?...
November 14, 2025 at 11:43 AM
Doing image analysis?

You struggle with object extraction, automation, or state-of-the-art ML tools?

Want to streamline workflows & get unbiased data! Learn all of that and more with BioVoxxel Online Courses

Don't miss out on the expiring 2025 discounts — Enroll NOW!

#ImageAnalysis #Microscopy
November 12, 2025 at 1:06 PM
Ever wondered if analyzing your images by using intensity Z-projections impacts your data?

Happy to announce my guest article in Microscopy & Analysis on that topic. It's a very short read but worth for everyone dealing with image analysis!

buff.ly/KJ147tI

#Microscopy #ZProjection #ImageAnalysis
November 10, 2025 at 4:05 PM
Colocalization isn't just "overlap"—it's potentially 4 distinct analyses or more.

Check out how to dissect colocalization analysis and get a glance on pitfalls and methods to report robust colocalization results.

Read newsletter now! bit.ly/46mYBL7

#Microscopy #BioImageAnalysis #Colocalization
November 5, 2025 at 9:10 AM
Happy "#FluorescentFriday",

actually luminescence 🌌 🌈

Just feel like sharing some incredible moments recently captured near Tromsø, Norway

Experiencing auroras in nature makes me feel tiny and special at the same time.

It puts daily life into perspective & sparks huge gratefulness 💚

#Auroras
October 24, 2025 at 8:01 AM
🧠 Even in the age of AI, classical image filters still matter!
They reduce noise, preserve edges, and boost segmentation + ML performance.
Filter smart — shape what your algorithm sees.

🔗 Read more: “To filter, or not to filter?” #ImageAnalysis #AI #Microscopy #Segmentation

bit.ly/46mYBL7
October 22, 2025 at 8:15 AM
🔬 Blinded by colors?

Color ≠ Intensity!

Quantifying intensities from RGB images (e.g. fluorescence, blots, ...) is mostly misleading!

Check your image data type carefully!

Learn more in Newsletter No. 5 - To analyze RGB images, or NOT to analyze RGB images?

Read and subscribe: bit.ly/46mYBL7
October 8, 2025 at 8:15 AM
Bio-Imaging with Shakespeare: pseudocoloring (LUTs) — reveal hidden imaging issues and highlight important data.

✔ Spot noise, shading & saturation
✔ Map data for spatial insight
✔ Make color accessible to all
✔ Why to use a calibration bar

Full guide, tools & tutorial inside 👇
buff.ly/8x7Shiq
September 24, 2025 at 8:15 AM
No. 3 - To Script it, or not to Script it?

ImageJ's GenericDialog or ImageJ2 Script Parameter driven dialogs.
Which one's for you and fits your needs?

BioVoxxel’s latest "Bio-Imaging with Shakespeare" Newsletter explores the trade-offs:
buff.ly/8x7Shiq

#BioImageAnalysis #ImageJ #SciJava #IJMacro
September 10, 2025 at 8:15 AM
Amazing BlueSky Summer Sale

Last Chance — ONLY 1 DAY LEFT

For any of the #BioVoxxel online self-learning courses

buff.ly/o64cW9Y

Use the code "BSKY101010" at checkout to redeem your discount.

Hurry, and see if any codes are left for you!

Only 10 codes until August 31st 2025 available!🏃‍♂️
August 30, 2025 at 10:00 PM
In the 2nd edition of Bio-Imaging with Shakespeare we meet a pesky gremlin — uneven illumination (aka shading, intensity non-uniformity). 🎭🔬 💻

It can quietly bias your segmentation and image analysis results!

So, detect it early, correct it appropriately!

Subscribe on LinkedIn buff.ly/cLPh8eZ
August 27, 2025 at 8:15 AM
Amazing BlueSky Summer Sale

Your choice: Any of the #BioVoxxel online self-learning courses

buff.ly/o64cW9Y

The first 10 participants that enroll in the next 10 days get 10% OFF

Use the code "BSKY101010" at checkout to redeem your discount.

Hurry, only 10 chances until August 31st 2025!🏃‍♂️🏃‍♀️
August 21, 2025 at 6:00 AM
BlueSky Summer Sale starting tomorrow 8:00 AM (CET) for all individual online courses.

Make sure you are ready for the run: 10% Off for the first 10 that enroll in the next 10 days.

Check out the courses, so you are ready to choose faster then your competitors 🏃‍♀️ 🏅

buff.ly/o64cW9Y
August 20, 2025 at 1:00 PM
Embark on your journey to become an #ImageAnalysis champion today! 🏅 🏆

Sign up here: buff.ly/o64cW9Y

1. Basic Microscopic Image Analysis
2. Automate Analyses with #ImageJ #Macro #Scripting
3. Transform Pixels to Patterns with #MachineLearning

#Fiji #BioVoxxel

Any Questions? -> DM me Bsky
August 20, 2025 at 1:00 PM
I am stunned!
First edition of the "Bio-Imaging with Shakespeare" LinkedIn Newsletter (buff.ly/8x7Shiq) is out for 15h and already 130 subscribers.

If you are interested in the topic FOLLOW ME on LinkedIn and Bsky and SUBSCRIBE
on LinkedIn buff.ly/cLPh8eZ

#bioimageanalysis #biovoxxel #fiji
August 13, 2025 at 11:59 PM
Eager to stir curiosity and foster dialogue on varied viewpoints? Connect with me on LinkedIn, subscribe to the newsletter (Follow here: buff.ly/cLPh8eZ), and spread the word within your network. Let's engage and exchange ideas!

#BioImaging #ImageAnalysis #BioVoxxel #Conversation
August 13, 2025 at 8:15 AM
To interpolate or not to interpolate ? That is the question!

1st edition of the Bio-Imaging with Shakespeare Newsletter I start a biweekly series containing takes on bio-image analysis, processing techniques, insight into tools and trade‑offs as well as best practices.

Subscribe buff.ly/cLPh8eZ
August 13, 2025 at 8:15 AM
In #imageanalysis like in hiking, preparation and training is key to master challenges ahead.

🥾 Hiker: Basic Microscopic Image Processing and Analysis
🏔 Climber: ImageJ Macro Scripting
🧗 Free Climber: Applied #machinelearning

Choose your challenge 👉 www.biovoxxel.de/individual-w...

#Fiji #ImageJ
July 27, 2025 at 6:43 PM
🔥 The Image Analysis Hero Bundle
Get all 3 courses in one unbeatable package!
Everything from foundations over analysis automation to ML.
Level up from confused to confident, beginner to analysis hero.

🦸‍♀️🦸‍♂️ Your complete training path in scientific image analysis.

myablefy.com/s/biovoxxel/...
July 21, 2025 at 7:49 PM
🎉 Amazing NEWS for #ImageAnalysis & #LifeSciences folks!
The ultimate #imageanalysis #hattrick is here 🧠🔬✨

www.biovoxxel.de/individual-w...

Read the 🧵👇

All necessary info and links at the end !

#bioimaging #learning #science #lifescience #microscopy #fiji #imagej #machinelearning #deeplearning
July 21, 2025 at 7:49 PM
If you work at a computer all day, nothing beats the tactile joy of offline hobbies—like baking something beautiful and delicious.
But if you're deep into image analysis, there's a special kind of reward in automating with ImageJ macros. Different work, different dopamine.

Interested in the latter?
April 25, 2025 at 6:39 AM
🚀 Tired of manual image analysis or scared of scripting?

Our self-paced “ImageJ Macro Scripting for Automatic Image Analysis” course makes automation easy—no coding experience needed!

Start from scratch & build pro-level macros.

www.biovoxxel.de/individual-w...

#ImageJ #MacroScripting
April 23, 2025 at 2:59 PM
Expand your scientific reach by enhancing visual communication. Present your research in a clear, engaging, and easily understandable way - whether in presentations, posters, or publications.

Acquire all necessary skills in the Scientific Illustration Inkscape Masterclass.

Promo-Code: BUNNY2025
April 14, 2025 at 11:04 AM
First small step into the future op publication figures.

Try the interactive publication figure
March 26, 2025 at 12:07 PM
For a more colorful scientific spring. 🦜🎨💻🔬

The BioVoxxel LUT Channels Tool received a few new standard colors.

Check out tools, options and installation

BTW: The NEW Scientific Image Editing and Figure Creation online course is coming soon, stay tuned and don't miss!

More info and vouchers
March 26, 2025 at 11:14 AM