bioRxiv Genomics
@biorxiv-genomic.bsky.social
Systematic morphological profiling of human and mouse miRNAs in 24M single cells https://www.biorxiv.org/content/10.1101/2025.11.14.687149v1
November 15, 2025 at 3:33 AM
Systematic morphological profiling of human and mouse miRNAs in 24M single cells https://www.biorxiv.org/content/10.1101/2025.11.14.687149v1
Development and validation of an exome-wide SNP genotyping array for genomic prediction, GWAS and assessment of introgressive hybridization between black and red spruces, and transferability to white and Norway spruces https://www.biorxiv.org/content/10.1101/2025.11.14.688480v1
November 15, 2025 at 2:33 AM
Development and validation of an exome-wide SNP genotyping array for genomic prediction, GWAS and assessment of introgressive hybridization between black and red spruces, and transferability to white and Norway spruces https://www.biorxiv.org/content/10.1101/2025.11.14.688480v1
Emergence of Dual-Risk Klebsiella pneumoniae: Global Hotspots of Convergence Between Resistance and Hypervirulence https://www.biorxiv.org/content/10.1101/2025.11.13.688379v1
November 15, 2025 at 1:33 AM
Emergence of Dual-Risk Klebsiella pneumoniae: Global Hotspots of Convergence Between Resistance and Hypervirulence https://www.biorxiv.org/content/10.1101/2025.11.13.688379v1
The genome of Doleromyrma darwiniana and annotations for five additional Dolichoderinae species https://www.biorxiv.org/content/10.1101/2025.11.13.688362v1
November 15, 2025 at 12:33 AM
The genome of Doleromyrma darwiniana and annotations for five additional Dolichoderinae species https://www.biorxiv.org/content/10.1101/2025.11.13.688362v1
SMARCA2 is an essential and potent cofactor for a specific subset of the glucocorticoid response in A549 cells https://www.biorxiv.org/content/10.1101/2025.11.13.688306v1
November 14, 2025 at 6:32 PM
SMARCA2 is an essential and potent cofactor for a specific subset of the glucocorticoid response in A549 cells https://www.biorxiv.org/content/10.1101/2025.11.13.688306v1
FOXA1 mutations co-opt nascent transcription factor networks in partnership with androgen receptor to enhance prostate tumorigenicity https://www.biorxiv.org/content/10.1101/2025.11.13.688263v1
November 14, 2025 at 6:32 PM
FOXA1 mutations co-opt nascent transcription factor networks in partnership with androgen receptor to enhance prostate tumorigenicity https://www.biorxiv.org/content/10.1101/2025.11.13.688263v1
Diversity and distribution of the subtelomeric Y' elements across Saccharomyces cerevisiae https://www.biorxiv.org/content/10.1101/2025.11.13.688250v1
November 14, 2025 at 4:33 PM
Diversity and distribution of the subtelomeric Y' elements across Saccharomyces cerevisiae https://www.biorxiv.org/content/10.1101/2025.11.13.688250v1
A comprehensive AMR genotype-phenotype database (CABBAGE) https://www.biorxiv.org/content/10.1101/2025.11.12.688105v1
November 14, 2025 at 4:32 AM
A comprehensive AMR genotype-phenotype database (CABBAGE) https://www.biorxiv.org/content/10.1101/2025.11.12.688105v1
Plasmodium vivax genome evolution for erythrocyte invasion in Duffy-negative infections from East Africa https://www.biorxiv.org/content/10.1101/2025.11.13.688259v1
November 14, 2025 at 3:32 AM
Plasmodium vivax genome evolution for erythrocyte invasion in Duffy-negative infections from East Africa https://www.biorxiv.org/content/10.1101/2025.11.13.688259v1
Circulating chromatin reveals the effects of disease-associated variants on gene regulation https://www.biorxiv.org/content/10.1101/2025.11.12.688010v1
November 14, 2025 at 12:32 AM
Circulating chromatin reveals the effects of disease-associated variants on gene regulation https://www.biorxiv.org/content/10.1101/2025.11.12.688010v1
MELODY: Mediation Analysis in Logistic Regression for High-Dimensional Mediators and a Binary Outcome https://www.biorxiv.org/content/10.1101/2025.11.12.688038v1
November 13, 2025 at 8:37 PM
MELODY: Mediation Analysis in Logistic Regression for High-Dimensional Mediators and a Binary Outcome https://www.biorxiv.org/content/10.1101/2025.11.12.688038v1
Differential nucleosome organization in human interphase and metaphase chromosomes https://www.biorxiv.org/content/10.1101/2025.11.11.687715v1
November 13, 2025 at 3:34 AM
Differential nucleosome organization in human interphase and metaphase chromosomes https://www.biorxiv.org/content/10.1101/2025.11.11.687715v1
Tick Genome Assemblies: Overcoming biological limitations through advances in sequencing and assembly https://www.biorxiv.org/content/10.1101/2025.11.11.687924v1
November 13, 2025 at 3:34 AM
Tick Genome Assemblies: Overcoming biological limitations through advances in sequencing and assembly https://www.biorxiv.org/content/10.1101/2025.11.11.687924v1
Diverse expression and modification of tRNAs and tRNA-derived RNAs in 19 mouse tissues https://www.biorxiv.org/content/10.1101/2025.11.11.685198v1
November 13, 2025 at 2:33 AM
Diverse expression and modification of tRNAs and tRNA-derived RNAs in 19 mouse tissues https://www.biorxiv.org/content/10.1101/2025.11.11.685198v1
Putative azithromycin-resistance mutations in Chlamydia trachomatis are globally distributed but arose before azithromycin was discovered https://www.biorxiv.org/content/10.1101/2025.11.10.687758v1
November 12, 2025 at 10:33 PM
Putative azithromycin-resistance mutations in Chlamydia trachomatis are globally distributed but arose before azithromycin was discovered https://www.biorxiv.org/content/10.1101/2025.11.10.687758v1
Dissecting the Cellular Genetics of Cardiovascular Disease Through Endothelial and Immune Compartments Profiling https://www.biorxiv.org/content/10.1101/2025.11.10.687750v1
November 12, 2025 at 9:33 PM
Dissecting the Cellular Genetics of Cardiovascular Disease Through Endothelial and Immune Compartments Profiling https://www.biorxiv.org/content/10.1101/2025.11.10.687750v1
Superabundant microRNAs are transcribed from human rDNA spacer promoters insulated by CTCF https://www.biorxiv.org/content/10.1101/2025.11.10.687711v1
November 12, 2025 at 8:34 PM
Superabundant microRNAs are transcribed from human rDNA spacer promoters insulated by CTCF https://www.biorxiv.org/content/10.1101/2025.11.10.687711v1
Metagenomes and Metagenome-Assembled Genomes from Microbial Communities in a Biological Nutrient Removal Plant Operated at Hamptons Road Sanitation District (HRSD) with High and Low Dissolved Oxygen Conditions https://www.biorxiv.org/content/10.1101/2025.11.10.687637v1
November 12, 2025 at 3:39 PM
Metagenomes and Metagenome-Assembled Genomes from Microbial Communities in a Biological Nutrient Removal Plant Operated at Hamptons Road Sanitation District (HRSD) with High and Low Dissolved Oxygen Conditions https://www.biorxiv.org/content/10.1101/2025.11.10.687637v1
Chromosome-level genome assemblies of Nicotiana attenuata and Nicotiana obtusifolia https://www.biorxiv.org/content/10.1101/2025.11.10.687602v1
November 12, 2025 at 12:34 AM
Chromosome-level genome assemblies of Nicotiana attenuata and Nicotiana obtusifolia https://www.biorxiv.org/content/10.1101/2025.11.10.687602v1
Hidden Markov Models Detect Recombination and Ancestry of SARS-CoV-2 https://www.biorxiv.org/content/10.1101/2025.11.08.687354v1
November 11, 2025 at 2:33 AM
Hidden Markov Models Detect Recombination and Ancestry of SARS-CoV-2 https://www.biorxiv.org/content/10.1101/2025.11.08.687354v1
Longitudinal multimodal characterization of radiation dermatitis in the C57BL/6J mouse model https://www.biorxiv.org/content/10.1101/2025.11.08.687376v1
November 10, 2025 at 10:37 PM
Longitudinal multimodal characterization of radiation dermatitis in the C57BL/6J mouse model https://www.biorxiv.org/content/10.1101/2025.11.08.687376v1
Can Lightweight LLM Agents Improve Spatial TranscriptomicsAnnotation? https://www.biorxiv.org/content/10.1101/2025.11.08.687410v1
November 10, 2025 at 10:36 PM
Can Lightweight LLM Agents Improve Spatial TranscriptomicsAnnotation? https://www.biorxiv.org/content/10.1101/2025.11.08.687410v1
A chromosome-scale genome assembly for Clark's Nutcracker (Nucifraga columbiana) https://www.biorxiv.org/content/10.1101/2025.11.06.687043v1
November 10, 2025 at 1:36 PM
A chromosome-scale genome assembly for Clark's Nutcracker (Nucifraga columbiana) https://www.biorxiv.org/content/10.1101/2025.11.06.687043v1
Challenges in predicting chromatin accessibility differences between species https://www.biorxiv.org/content/10.1101/2025.11.09.687449v1
November 10, 2025 at 12:34 PM
Challenges in predicting chromatin accessibility differences between species https://www.biorxiv.org/content/10.1101/2025.11.09.687449v1
Integrated analysis of multimodal long-read epigenetic assays https://www.biorxiv.org/content/10.1101/2025.11.09.687458v1
November 10, 2025 at 3:36 AM
Integrated analysis of multimodal long-read epigenetic assays https://www.biorxiv.org/content/10.1101/2025.11.09.687458v1