Amina Abdullahi @NAACL
amilah-dul.bsky.social
Amina Abdullahi @NAACL
@amilah-dul.bsky.social
CS PhD student @Brown | Biomedical AI | IR | NLP.
Bio: https://tassabdul.github.io/
6/n: We release:
 - The dataset for KG-based inductive reasoning: huggingface.co/Tassy24
- Paper: arxiv.org/abs/2502.13344
- Repo: github.com/rsinghlab/K-Pa….

Big thanks to all my incredible collaborators- this wouldn’t be possible without your brilliance!
Tassy24 (Tassallah Abdullahi)
User profile of Tassallah Abdullahi on Hugging Face
huggingface.co
June 2, 2025 at 9:20 PM
5/n: This open doors in biomedical AI:
• Structured KG reasoning + LLMs' generative power = transparent, scientific discovery.
• Imagine helping scientists understand why a treatment works, not just what!
June 2, 2025 at 9:20 PM
4/n: Why this matters:
• Interpretability baked in - paths double as explanations.
•Efficiency - huge KG reductions help scale to real-world biomedical workloads.
•Generalization - works in unseen (inductive) settings.
June 2, 2025 at 9:20 PM
3/n: 🔥 Results across model families (LLMs & GNNs):
• Tx-Gemma 27B: +19.8 F1 on interaction severity
• Llama 70B: +8.5 F1 on similar tasks.
• EmerGNN: trains on 90% smaller KG with no loss in accuracy
• That cross-architecture gain is rarely seen and hard to ignore.
June 2, 2025 at 9:20 PM
2/n: K-Paths is not just a retrieval method.
It’s a pipeline that combines:
• Heuristics path finding (Yen’s algorithm)
• Diversity-aware selection
• Graph pruning
• Natural language transformation to aid reasoning for LLMs.
•GNN/LLM integration
June 2, 2025 at 9:20 PM
1/n: Most KG methods for drug discovery tasks rely on GNNs or focus on narrow QA tasks.

K-Paths is model-agnostic and reframes KG use for reasoning & discovery, especially in inductive settings (e.g. emerging drugs/diseases).
June 2, 2025 at 9:20 PM
Amazing! Congratulations!!!
May 5, 2025 at 9:28 PM
Thank you for responding. I have not done UX work but my research focuses on human-centered AI, exploring how AI can be adapted to better serve human needs across various applications. I’m happy to share more details of my work in a less constrained setting. Here is my resume: tassabdul.github.io
Tassallah Amina Abdullahi
PhD student at Brown University
tassabdul.github.io
November 29, 2024 at 11:29 PM
Hi Dr @mihaelav.bsky.social, I am super interested. My research lies at the intersection of NLP and IR aiming to derive factual insights from extensive literature or knowledge graphs to support accurate, reliable, and evidence-based decision-making in various domains. Thanks your consideration.
November 29, 2024 at 6:16 PM
I’d like to join. Thanks!
November 24, 2024 at 8:15 PM
Hi Dr @boghuma.bsky.social , I am computer science researcher and I would love to be included in the starter pack. Thanks.
Bluesky
Hiboghuma.bsky.social
November 20, 2024 at 7:28 PM