Mariela Cortés López
@altspliced.bsky.social
Alternative splicing on alternative music.
#SingleCell #LongReads #RNA 🇲🇽
📍 NYC
https://mcortes-lopez.github.io/
https://www.songkick.com/users/alt_spliced
#SingleCell #LongReads #RNA 🇲🇽
📍 NYC
https://mcortes-lopez.github.io/
https://www.songkick.com/users/alt_spliced
Intriguing indeed. The Al'Khafaji lab recently compared PIPseq and 10x for isoform sequencing. Although PIPseq v4, diff. gene capture between platforms is evident. They suggest that some of it might be due to high RNAse content after more cell stress in the PIPseq protocol. bsky.app/profile/aziz...
Fitting first post to BlueSky
Recapping a whirlwind week.. 1) isoforms, 2)illumina, 3)SBX
1) Check out our new preprint: Multi-platform evaluation and optimization of single-cell RNA isoform sequencing.
Ever wonder if/how different single-cell platforms impact RNA isoform sequencing performance?
Recapping a whirlwind week.. 1) isoforms, 2)illumina, 3)SBX
1) Check out our new preprint: Multi-platform evaluation and optimization of single-cell RNA isoform sequencing.
Ever wonder if/how different single-cell platforms impact RNA isoform sequencing performance?
Multi-platform evaluation and optimization of single-cell RNA isoform sequencing
Long-read transcriptomics enables isoform identification and quantification at single-cell resolution, but analysis is complicated by artifacts introduced during library preparation. We characterize t...
www.biorxiv.org
March 15, 2025 at 4:45 PM
Intriguing indeed. The Al'Khafaji lab recently compared PIPseq and 10x for isoform sequencing. Although PIPseq v4, diff. gene capture between platforms is evident. They suggest that some of it might be due to high RNAse content after more cell stress in the PIPseq protocol. bsky.app/profile/aziz...
Let's hope that the new administration doesn't ban #RNA research from their agenda. In the meantime 2 things: 1) There are some organized actions regarding funding restrictions like form.jotform.com/250226137228... 2) And grants are great but improved postdoc conditions are better #WCMPU-UAW ✊
VoterVoice - Error 404
www.votervoice.net
January 29, 2025 at 3:59 AM
Let's hope that the new administration doesn't ban #RNA research from their agenda. In the meantime 2 things: 1) There are some organized actions regarding funding restrictions like form.jotform.com/250226137228... 2) And grants are great but improved postdoc conditions are better #WCMPU-UAW ✊