@alexirrthum.bsky.social
Biomedical data scientist and geneticist, PhD. I work on health IT, data science, AI, bioinformatics and biomedical research.
Very nice overview of AI software for proteins + classical bioinfo, molecular dynamics software etc by Tamarind Bio @denizkavi.bsky.social tamarind.bio/blog/a-comprehensive-introduction-to-ai-for-proteins
December 24, 2025 at 4:02 PM
Very nice overview of AI software for proteins + classical bioinfo, molecular dynamics software etc by Tamarind Bio @denizkavi.bsky.social tamarind.bio/blog/a-comprehensive-introduction-to-ai-for-proteins
Great write-up from @simonwillison.net on how to use unrestrained async coding agents (Claude Code for Web, Codex Cloud, Jules) to conduct exploratory research. Good timing to use my free Claude credits to run some fun biomed explorations ! #LLM #AI #bioinfo 🧫🧬💊🩻
I've been getting a lot of value using coding agents for code research tasks recently - I have a dedicated simonw/research GitHub repo and I frequently have them run detailed experiments and write up the results. Here's how I'm doing that + some examples:
simonwillison.net/2025/Nov/6/a...
simonwillison.net/2025/Nov/6/a...
Code research projects with async coding agents like Claude Code and Codex
I’ve been experimenting with a pattern for LLM usage recently that’s working out really well: asynchronous code research tasks. Pick a research question, spin up an asynchronous coding agent and …
simonwillison.net
November 6, 2025 at 8:51 PM
Great write-up from @simonwillison.net on how to use unrestrained async coding agents (Claude Code for Web, Codex Cloud, Jules) to conduct exploratory research. Good timing to use my free Claude credits to run some fun biomed explorations ! #LLM #AI #bioinfo 🧫🧬💊🩻
Fresh off the press, the AACR Cancer Progress Report 2025 (282p pdf) is a treasure trove of up-to-date informations on cancer, for researchers and laypeople alike cancerprogressreport.aacr.org/progress/get... #CancerResearch @theaacr.bsky.social
September 17, 2025 at 4:04 PM
Fresh off the press, the AACR Cancer Progress Report 2025 (282p pdf) is a treasure trove of up-to-date informations on cancer, for researchers and laypeople alike cancerprogressreport.aacr.org/progress/get... #CancerResearch @theaacr.bsky.social