Adam Tyson
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adamltyson.com
Adam Tyson
@adamltyson.com
720 followers 190 following 24 posts
Head Research Engineer at Sainsbury Wellcome Centre, UCL. I lead @neuroinformatics.dev & @brainglobe.info. We build open source software for neuroscience and machine learning.

Runner, cyclist, sandwich enthusiast.

https://adamltyson.com
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adamltyson.com
4. We demonstrated this by performing automated registration, cell detection, and data visualization with a brain injected with a retrograde viral tracer in the magneto-responsive brain area, Cluster N.
Application of the BrainGlobe toolbox for brain registration, automated cell detection and object segmentation.
March 11, 2025 at 2:27 PM
adamltyson.com
2. Using serial-section two-photon tomography, 10 blackcap brains were imaged. These were averaged to create a high-quality, spatially averaged brain template. This template was then expertly annotated to delineate brain regions common to all bird species and those involved in magnetoreception.
Overview of the approach for creating a 3D bird brain atlas for the night-migratory Eurasian blackcap (Sylvia atricapilla).
March 11, 2025 at 2:27 PM
adamltyson.com
New preprint! We built a 3D brain atlas for the migratory and magnetoreceptive Eurasian blackcap.

The atlas is available in @brainglobe.info, and is hopefully the first of many!

Full details:
brainglobe.info/blackcap

Preprint:
www.biorxiv.org/content/10.1...

Short thread:
Overview of the Eurasian Blackcap brain atlas showing annotated brain regions.
March 11, 2025 at 2:27 PM