Jan
@yawnxyz.bsky.social
UX designer, full-stack engineer, and bioinformatics engineer.
I build custom tools for researchers — labspace.ai
Current — Phage Directory: https://bsky.app/profile/phagedirectory.bsky.social
Prev: Phage Australia, CMU
I build custom tools for researchers — labspace.ai
Current — Phage Directory: https://bsky.app/profile/phagedirectory.bsky.social
Prev: Phage Australia, CMU
Reposted by Jan
Your lab scissors are actually a parafilmase - a highly specialized enzyme that catalyzes the precise cutting of parafilm through a metal-dependent mechanism
February 16, 2025 at 8:22 PM
Your lab scissors are actually a parafilmase - a highly specialized enzyme that catalyzes the precise cutting of parafilm through a metal-dependent mechanism
bsky users have trouble understanding terms of service when they sign up for a service like this
November 28, 2024 at 4:41 PM
bsky users have trouble understanding terms of service when they sign up for a service like this
I wish bsky had a way to bookmark tweets so I have a way to never come back to them
November 28, 2024 at 2:00 AM
I wish bsky had a way to bookmark tweets so I have a way to never come back to them
don't tell bsky users that all of their posts are public... that everything on bsky is publicly accessible and is probably already used for training AI as we speak
Releasing: a dataset of two million Bluesky posts.
This dataset has been collected using Bluesky's API, and I hope it will be useful for all the researchers out there!
This dataset has been collected using Bluesky's API, and I hope it will be useful for all the researchers out there!
November 28, 2024 at 1:59 AM
don't tell bsky users that all of their posts are public... that everything on bsky is publicly accessible and is probably already used for training AI as we speak
Reposted by Jan
Great review by @pinholab.bsky.social and Simon Foster on the current knowledge regarding growth, elongation and division of Staphylococcus aureus www.annualreviews.org/content/jour...
November 21, 2024 at 5:42 PM
Great review by @pinholab.bsky.social and Simon Foster on the current knowledge regarding growth, elongation and division of Staphylococcus aureus www.annualreviews.org/content/jour...
Reposted by Jan
Hello 🦋 #protein / #microbio / #BioML community! We are excited to release Gaia🌎, a context-aware protein search tool, extending protein search and discovery capabilities beyond sequence and structure, to include *genomic context*. Search your favorite protein sequences with on gaia.tatta.bio
November 19, 2024 at 3:07 PM
Hello 🦋 #protein / #microbio / #BioML community! We are excited to release Gaia🌎, a context-aware protein search tool, extending protein search and discovery capabilities beyond sequence and structure, to include *genomic context*. Search your favorite protein sequences with on gaia.tatta.bio
Had to update my CV today...
so ofc instead of actually working on it, I built an app to update my resume/cv, and it saves/loads/syncs to my Google Sheets
using a schema makes it easy to move sections around, add new publications, etc.
lmk if you want this!
so ofc instead of actually working on it, I built an app to update my resume/cv, and it saves/loads/syncs to my Google Sheets
using a schema makes it easy to move sections around, add new publications, etc.
lmk if you want this!
November 19, 2024 at 11:41 PM
Had to update my CV today...
so ofc instead of actually working on it, I built an app to update my resume/cv, and it saves/loads/syncs to my Google Sheets
using a schema makes it easy to move sections around, add new publications, etc.
lmk if you want this!
so ofc instead of actually working on it, I built an app to update my resume/cv, and it saves/loads/syncs to my Google Sheets
using a schema makes it easy to move sections around, add new publications, etc.
lmk if you want this!
I'm helping @jamesgurney.bsky.social restart @phagepapers.bsky.social
I just wrote some code that once a day:
1. Searches some Pubmed keywords and adds the results to Google sheets
2. Posts a random link from the Sheets to Bluesky
Would anyone like a writeup?
Or expand beyond just phage papers?
I just wrote some code that once a day:
1. Searches some Pubmed keywords and adds the results to Google sheets
2. Posts a random link from the Sheets to Bluesky
Would anyone like a writeup?
Or expand beyond just phage papers?
November 18, 2024 at 9:59 PM
I'm helping @jamesgurney.bsky.social restart @phagepapers.bsky.social
I just wrote some code that once a day:
1. Searches some Pubmed keywords and adds the results to Google sheets
2. Posts a random link from the Sheets to Bluesky
Would anyone like a writeup?
Or expand beyond just phage papers?
I just wrote some code that once a day:
1. Searches some Pubmed keywords and adds the results to Google sheets
2. Posts a random link from the Sheets to Bluesky
Would anyone like a writeup?
Or expand beyond just phage papers?
Why a good lab website matters
DOI: 10.1038/s42255-023-00797-9
https://www.nature.com/articles/s42255-023-00797-9
DOI: 10.1038/s42255-023-00797-9
https://www.nature.com/articles/s42255-023-00797-9
November 18, 2024 at 9:50 PM
Why a good lab website matters
DOI: 10.1038/s42255-023-00797-9
https://www.nature.com/articles/s42255-023-00797-9
DOI: 10.1038/s42255-023-00797-9
https://www.nature.com/articles/s42255-023-00797-9
I just realized AT Protocol, the system behind Bluesky, can be used for science:
DOI — as a DOI system for papers, datasets, anything
Publishing — you can publish long-form posts on your own servers
Lab websites — hosted by your lab
Peer Review — can be built on top of the reply mechanism
DOI — as a DOI system for papers, datasets, anything
Publishing — you can publish long-form posts on your own servers
Lab websites — hosted by your lab
Peer Review — can be built on top of the reply mechanism
🌟 WhiteWind Update 🌟
Thank you for always using WhiteWind.
We have implemented a new feature that allows rich rendering of links from Frontpage, a service where you can post article links and engage in discussions on atproto!
For more details, please check the article on link cards.
Thank you for always using WhiteWind.
We have implemented a new feature that allows rich rendering of links from Frontpage, a service where you can post article links and engage in discussions on atproto!
For more details, please check the article on link cards.
🌟WhiteWind Update 20241102🌟 | WhiteWind | WhiteWind blog
atproto service integrations are crafted with meticulous attention to detail.
 Rendering Frontpage Links in Reaction Section
With the April 26 update, a new feature was introduced to display links to articles containing URLs on any atproto service, not limited to Bluesky, directly in the reac...
whtwnd.com
November 15, 2024 at 4:19 PM
I just realized AT Protocol, the system behind Bluesky, can be used for science:
DOI — as a DOI system for papers, datasets, anything
Publishing — you can publish long-form posts on your own servers
Lab websites — hosted by your lab
Peer Review — can be built on top of the reply mechanism
DOI — as a DOI system for papers, datasets, anything
Publishing — you can publish long-form posts on your own servers
Lab websites — hosted by your lab
Peer Review — can be built on top of the reply mechanism
Reposted by Jan
i’m not confident we’ll necessarily want to build this directly into the product (tradeoffs to consider) but the fact that it can be done in the ecosystem is awesome. let the ecosystem cook
Starter packs are genius, but I was surprised there wasn't a list of them for people to find.
So I built it:
blueskydirectory.com/starter-pack...
The website monitors the packs being shared and adds the ones it finds to the database.
Missed your stater pack? Message me and I'll get it added.
So I built it:
blueskydirectory.com/starter-pack...
The website monitors the packs being shared and adds the ones it finds to the database.
Missed your stater pack? Message me and I'll get it added.
All - Bluesky Directory
A curated collection of all things relating to the Blue Sky social media platform.
blueskydirectory.com
November 12, 2024 at 2:57 PM
i’m not confident we’ll necessarily want to build this directly into the product (tradeoffs to consider) but the fact that it can be done in the ecosystem is awesome. let the ecosystem cook
Remember when people posted food on Twitter? This is my chicken skewer + cauliflower rice and beans. Cooked in a reduced Thai chili sauce for extra flavor. Better than rice and beans!
April 15, 2023 at 10:54 AM
Remember when people posted food on Twitter? This is my chicken skewer + cauliflower rice and beans. Cooked in a reduced Thai chili sauce for extra flavor. Better than rice and beans!
Messina has the best gelato!!
April 15, 2023 at 10:52 AM
Messina has the best gelato!!
Wait how do you connect your own domain here? And does Baku have an API?! One that’s better than twitters?!
April 15, 2023 at 10:48 AM
Wait how do you connect your own domain here? And does Baku have an API?! One that’s better than twitters?!
Anyone else feel this place is sacred and are afraid to post spicy takes here?!
April 15, 2023 at 10:46 AM
Anyone else feel this place is sacred and are afraid to post spicy takes here?!
Hello world! Does bsky have a web app? I hate typing on my tiny iPhone lol
March 8, 2023 at 12:11 PM
Hello world! Does bsky have a web app? I hate typing on my tiny iPhone lol