Stable Isotope Ecology (CER, Kyoto Univ.)
stableisotopeecol.bsky.social
Stable Isotope Ecology (CER, Kyoto Univ.)
@stableisotopeecol.bsky.social
Facility for Stable Isotope Ecology in CER, Kyoto U. (w Kei Koba, he/him). Papers using stable isotopes I just found, status of our IRMSs. http://www.ecology.kyoto-u.ac.jp/~keikoba/english/KobaEnglish.html
Robust microbial interactions, not diversity, dominate metabolic thermal adjustment following decadal warming in a subtropical forest | Science Advances www.science.org/doi/10.1126/... #stableisotopes
Robust microbial interactions, not diversity, dominate metabolic thermal adjustment following decadal warming in a subtropical forest
Large soil carbon loss under future warming in subtropical forests may not occur due to microbial thermal adjustments.
www.science.org
November 15, 2025 at 12:33 PM
Nonliving respiration: Another breath in the soil? | Science Advances www.science.org/doi/10.1126/... #stableisotopes
Nonliving respiration: Another breath in the soil?
The respiration of organic matter in soils is not a cell-specific process and can spontaneously occur in an extracellular context.
www.science.org
November 15, 2025 at 12:22 PM
Qiu, Y., Felix, J.D., Murgulet, D. et al. Nitrogen Transformations, Source Dynamics, and Terrestrial-Aquatic Interactions in a Low Inflow Estuary. #stableisotopes Estuaries and Coasts 49, 17 (2026). doi.org/10.1007/s122...
Nitrogen Transformations, Source Dynamics, and Terrestrial-Aquatic Interactions in a Low Inflow Estuary - Estuaries and Coasts
Low-inflow estuaries (LIEs) have unique biogeochemical cycles that favor nutrient accumulation, making these systems particularly vulnerable to cultural eutrophication. This study investigated a LIE (...
doi.org
November 15, 2025 at 12:05 PM
Inter‐ and intraspecific variation in the degree of marine‐derived resources of amphidromous fishes - Tanaka - 2025 - Journal of Fish Biology #stableisotopes onlinelibrary.wiley.com/doi/10.1111/...
Inter‐ and intraspecific variation in the degree of marine‐derived resources of amphidromous fishes
Migratory animals often transport allochthonous materials, energy or organisms from donor to recipient ecosystems, thereby affecting the dynamics of consumers, communities and ecosystems in the recip....
onlinelibrary.wiley.com
November 14, 2025 at 4:36 AM
Machine-learning models of δ13C and δ15N isoscapes in Amazonian wood, EGUsphere [preprint], doi.org/10.5194/egus..., 2025. #stableisotopes
Machine-learning models of δ13C and δ15N isoscapes in Amazonian wood
Abstract. Illegal logging is one of the most prevalent environmental infractions in the Amazon, led by organized networks that cause substantial ecological and economic impacts. Official control mecha...
doi.org
November 13, 2025 at 10:07 PM
Jung, J., Duprey, N.N., Foreman, A.D. et al. Equatorial upwelling of phosphorus drives Atlantic N2 fixation and Sargassum blooms. #stableisotopes Nat. Geosci. (2025). doi.org/10.1038/s415...
Equatorial upwelling of phosphorus drives Atlantic N2 fixation and Sargassum blooms - Nature Geoscience
High near-surface nitrogen-fixation rates that promoted the recent growth of the Great Atlantic Sargassum Belt were tied to greater upwelling of phosphorus from the equatorial Atlantic, according to c...
doi.org
November 13, 2025 at 10:01 PM
Ecological Insights Into the Extinct Korean Sea Lion (Zalophus japonicus) in Korea Based on Stable Isotope Analysis of Bone Collagen - Lee - 2025 - Rapid Communications in Mass Spectrometry #stableisotopes analyticalsciencejournals.onlinelibrary.wiley.com/doi/full/10....
Ecological Insights Into the Extinct Korean Sea Lion (Zalophus japonicus) in Korea Based on Stable Isotope Analysis of Bone Collagen
Rationale The Japanese sea lion (Zalophus japonicus), once abundant in Japan, Korea, and Russia, went extinct by the mid-20th century due to hunting and environmental change. This study examines the...
analyticalsciencejournals.onlinelibrary.wiley.com
November 13, 2025 at 11:38 AM
Advancing Primary Direct Method for Absolute 13C/12C Isotope Amount Ratio Measurement of Carbon Dioxide in Air Using Infrared Absorption Spectroscopy | Analytical Chemistry pubs.acs.org/doi/10.1021/... #stableisotopes
Advancing Primary Direct Method for Absolute 13C/12C Isotope Amount Ratio Measurement of Carbon Dioxide in Air Using Infrared Absorption Spectroscopy
We present a comprehensive study aimed at advancing the NIST accurate isotope ratio infrared spectroscopy (AIR-IS) system (Fleisher et al., Nat. Phys. 17, 889–893, 2021), as a primary direct method for determining the absolute 13C/12C isotope amount ratio of CO2 in air. The AIR-IS system employs a dual-wavelength cavity ring-down spectrometer to measure the abundance of the two most prevalent isotopologues of carbon dioxide: 12C16O2 and 13C16O2. This study introduces key methodological improvements, including quantification of surface-associated effects, enhancement of laser-to-cavity coupling, and refinement of the underlying spectroscopic model. To illustrate its application, we analyze three significant CO2-in-air samples: (i) the natural Northern Continental air NIST Standard Reference Material, SRM® 1720, and (ii) two synthetic mixtures derived from pure CO2 gases sourced from the international P204 comparison study, establishing traceability of their 13C/12C isotope ratios to the International System of Units (SI). Our results highlight AIR-IS’s analytical performance, achieving 0.08‰ long-term precision for the absolute 13C/12C isotope ratio of the Northern Continental air standard monitored over five months, demonstrating agreement in isotope delta values within 0.3(0.2)‰ across a broad range (−1.515 to – 43.119‰ on the Vienna Peedee Belemnite, VPDB scale) for international samples, and constraining surface-associated uncertainty contributions to 0.2‰. AIR-IS measurements further provide a critical SI-traceable reference for CO2-in-air synthetic mixtures. Finally, we determine the 13C/12C isotope amount ratio for VPDB, contributing to independent efforts to refine its accepted value. Taken together, these results reinforce AIR-IS’s potential as a primary direct method for stable carbon isotope ratio measurements with implications for atmospheric research and isotope metrology.
pubs.acs.org
November 13, 2025 at 11:31 AM
N2 Clumped Isotope Measurements with Thermo Fisher Scientific Ultra High-Resolution IRMS and Applications to the Hydrosphere | Analytical Chemistry pubs.acs.org/doi/10.1021/... #stableisotopes
N2 Clumped Isotope Measurements with Thermo Fisher Scientific Ultra High-Resolution IRMS and Applications to the Hydrosphere
Because atmospheric N2 is highly enriched in 15N15N compared to stochastic expectations, its clumped-isotope signature (Δ30) can serve as a tracer for nitrogen cycling. Despite the environmental and g...
pubs.acs.org
November 13, 2025 at 11:28 AM
The airborne chicago water isotope spectrometer: an integrated cavity output spectrometer for measurements of the HDO ∕ H2O isotopic ratio in the Asian Summer Monsoon, Atmos. Meas. Tech., 18, 6465–6491, doi.org/10.5194/amt-..., 2025.#stableisotopes
The airborne chicago water isotope spectrometer: an integrated cavity output spectrometer for measurements of the HDO ∕ H2O isotopic ratio in the Asian Summer Monsoon
Abstract. We describe a new version of the Chicago Water Isotope Spectrometer (ChiWIS), designed for airborne measurements of vapor-phase water isotopologues in the dry upper troposphere and lower str...
doi.org
November 12, 2025 at 10:08 PM
Clumped isotope thermometry (Δ47) measurements in marine gastropods suggest equilibrium precipitation #stableisotopes www.sciencedirect.com/science/arti...
Clumped isotope thermometry (Δ47) measurements in marine gastropods suggest equilibrium precipitation
The clumped isotope paleothermometer (Δ47) has been used to reconstruct temperatures from various biogenic carbonate archives. Calibration studies dem…
www.sciencedirect.com
November 12, 2025 at 9:57 PM
Quantifying the origins of labile estuarine particulate organic matter of varying reactivity using a fatty acid isotope model based on a genetic algorithm #stableisotopes www.sciencedirect.com/science/arti...
Quantifying the origins of labile estuarine particulate organic matter of varying reactivity using a fatty acid isotope model based on a genetic algorithm
As a major link between oceanic and terrestrial carbon reservoirs, estuarine particulate organic matter (POM) exhibits highly dynamic molecular and is…
www.sciencedirect.com
November 12, 2025 at 9:52 PM
Pelagic productivity and abundance of competitors modulate trophic niche segregation between large predators | Proceedings of the Royal Society B: Biological Sciences royalsocietypublishing.org/doi/10.1098/... #stableisotopes
Pelagic productivity and abundance of competitors modulate trophic niche segregation between large predators | Proceedings of the Royal Society B: Biological Sciences
In the open ocean, large pelagic predators often share similar food resources and feeding grounds, probably avoiding competition and coexisting through niche partitioning. Building on this hypothesis, we combined spatial distribution data with isotopic ...
royalsocietypublishing.org
November 10, 2025 at 10:30 AM
Integrating isotope and fluorescence approaches for joint source tracking of nitrate and CDOM in an agricultural watershed - Zhou - 2025 - Journal of Environmental Quality #stableisotopes acsess.onlinelibrary.wiley.com/doi/10.1002/...
Integrating isotope and fluorescence approaches for joint source tracking of nitrate and CDOM in an agricultural watershed
Dual isotopes and fluorescence tracked nitrate sources in the Lujiang River. Soil nitrogen and fertilizers were major nitrate sources. Manure and sewage pollution increased downstream with urbanizat...
acsess.onlinelibrary.wiley.com
November 10, 2025 at 10:26 AM
Impact of Tusk Anomalies on the Long‐Term Foraging Ecology of Narwhals - Louis - 2025 - Ecology and Evolution #stableisotopes onlinelibrary.wiley.com/doi/full/10....
Impact of Tusk Anomalies on the Long‐Term Foraging Ecology of Narwhals
We combined stable δ13C and δ15N isotope analysis and genetic sexing to investigate whether narwhals with dental anomalies have a distinct long-term foraging ecology. Our results showed no difference....
onlinelibrary.wiley.com
November 10, 2025 at 9:56 AM
A sub-liter pretreatment method for Orbitrap–based freshwater phosphate oxygen isotope measurement #stableisotopes www.sciencedirect.com/science/arti...
A sub-liter pretreatment method for Orbitrap–based freshwater phosphate oxygen isotope measurement
Phosphate oxygen isotope composition (δ18O(PO43−)) provides critical insights into the sources and transformation processes of phosphorus in aquatic e…
www.sciencedirect.com
November 10, 2025 at 9:32 AM
Bayer, B., Kitzinger, K., Paul, N.L. et al. Minor contribution of ammonia oxidizers to inorganic carbon fixation in the ocean. #stableisotopes Nat. Geosci. 18, 1144–1151 (2025). doi.org/10.1038/s415...
Minor contribution of ammonia oxidizers to inorganic carbon fixation in the ocean - Nature Geoscience
Ammonia oxidizers contribute minimally to carbon fixation in the dark ocean despite their abundance at depth, according to enzyme inhibition experiments on water samples from two cruises.
doi.org
November 8, 2025 at 6:49 AM
Coupled nitrogen and iron redox cycling in the Paleoarchean: Insights from nitrogen isotope signatures of the ca. 3.25 Ga Mapepe Formation, Barberton Greenstone Belt #stableisotopes www.sciencedirect.com/science/arti...
Coupled nitrogen and iron redox cycling in the Paleoarchean: Insights from nitrogen isotope signatures of the ca. 3.25 Ga Mapepe Formation, Barberton Greenstone Belt
Earth’s surficial environments and biosphere have co-evolved through geological time. Constraining past biological activity is thus crucial for unders…
www.sciencedirect.com
November 8, 2025 at 3:57 AM
Long term tillage regime alters bacterial assimilation of xylose and cellulose | Applied and Environmental Microbiology journals.asm.org/doi/10.1128/... #stableisotopes
Long term tillage regime alters bacterial assimilation of xylose and cellulose | Applied and Environmental Microbiology
We applied DNA stable isotope probing in a microcosm experiment to understand the role of soil management (till vs no-till) in shaping bacterial carbon cycling. Our hypothesis was that a legacy of disturbance through tillage would exert a selective influence on bacterial growth dynamics, thereby altering bacterial processing of added carbon substrates. We found that lagged growth in tilled soil resulted in delayed bacterial assimilation of xylose and a streamlined, single carbon “channel” characterized by the co-metabolism of xylose and cellulose. In no-till soil, temporally distinct bacterial assimilation of xylose and cellulose by separate carbon “channels” was associated with higher carbon mineralization rates and total mineralization relative to tilled soil. Our findings indicate that soil management practices altered the growth dynamics of active carbon cycling bacteria. Lagged growth associated with a history of disturbance resulted in reduced carbon mineralization.
journals.asm.org
November 8, 2025 at 3:42 AM