Siyuan Luo
@siyuanluo.bsky.social
Excited to share our preprint on selecting validation metrics for single-cell and spatial omics! Explore how to evaluate embeddings, graphs, clustering, and spatial domains with biological relevance in mind. Plus, discover poem, our R package with new spatially-aware metrics!
doi.org/10.1101/2024...
doi.org/10.1101/2024...
On metrics for subpopulation detection in single-cell and spatial omics data
Benchmarks are crucial to understanding the strengths and weaknesses of the growing number of tools for single-cell and spatial omics analysis. A key task is to distinguish subpopulations within compl...
doi.org
December 5, 2024 at 8:03 AM
Excited to share our preprint on selecting validation metrics for single-cell and spatial omics! Explore how to evaluate embeddings, graphs, clustering, and spatial domains with biological relevance in mind. Plus, discover poem, our R package with new spatially-aware metrics!
doi.org/10.1101/2024...
doi.org/10.1101/2024...