RevathyKrishnamurthy
@revathykri.bsky.social
Phage biologist| Research Scientist| Mother of two curious minds | Views my own & repost are not endorsements.
Reposted by RevathyKrishnamurthy
Automated, almost-error-free consensus #assemblies with Autocycler
Impressive benchmarks in Fig 2B (below): ≤10 median errors PER genome
Once again, incredible, landmark work from @rrwick.bsky.social
doi.org/10.1093/bioi...
Tool here: github.com/rrwick/Autoc...
#bioinformatics #genomics
Impressive benchmarks in Fig 2B (below): ≤10 median errors PER genome
Once again, incredible, landmark work from @rrwick.bsky.social
doi.org/10.1093/bioi...
Tool here: github.com/rrwick/Autoc...
#bioinformatics #genomics
September 22, 2025 at 3:02 PM
Automated, almost-error-free consensus #assemblies with Autocycler
Impressive benchmarks in Fig 2B (below): ≤10 median errors PER genome
Once again, incredible, landmark work from @rrwick.bsky.social
doi.org/10.1093/bioi...
Tool here: github.com/rrwick/Autoc...
#bioinformatics #genomics
Impressive benchmarks in Fig 2B (below): ≤10 median errors PER genome
Once again, incredible, landmark work from @rrwick.bsky.social
doi.org/10.1093/bioi...
Tool here: github.com/rrwick/Autoc...
#bioinformatics #genomics
Am so proud to say the planet is in right hands! Thanks @Eaton Primary! A whole week of long distance conversation about his work in his school through phone, which he brought home for me to see!
April 4, 2025 at 7:12 PM
Am so proud to say the planet is in right hands! Thanks @Eaton Primary! A whole week of long distance conversation about his work in his school through phone, which he brought home for me to see!
Reposted by RevathyKrishnamurthy
Great talk on viromics methods by @ryancook94.bsky.social #Microbio2025 telling us his view on the good, the bad and the ugly.
Part of the story published here: doi.org/10.1093/isme...
Part of the story published here: doi.org/10.1093/isme...
April 3, 2025 at 10:01 AM
Great talk on viromics methods by @ryancook94.bsky.social #Microbio2025 telling us his view on the good, the bad and the ugly.
Part of the story published here: doi.org/10.1093/isme...
Part of the story published here: doi.org/10.1093/isme...
Reposted by RevathyKrishnamurthy
In a different type of session this morning at #Microbio2025 about translation where the @quadraminstitute.bsky.social’s Matt Gilmour is talking about industrial partnerships brokered by the Food Safety Research Network
April 2, 2025 at 9:53 AM
In a different type of session this morning at #Microbio2025 about translation where the @quadraminstitute.bsky.social’s Matt Gilmour is talking about industrial partnerships brokered by the Food Safety Research Network
Reposted by RevathyKrishnamurthy
Check out poster B286 #microbio2025 by @hannahvpye.bsky.social who is presenting the BronchoPhage study in which we are developing a phage-based therapy for bronchiectasis.
Hannah also gave a great flash talk!
Hannah also gave a great flash talk!
April 2, 2025 at 11:13 AM
Check out poster B286 #microbio2025 by @hannahvpye.bsky.social who is presenting the BronchoPhage study in which we are developing a phage-based therapy for bronchiectasis.
Hannah also gave a great flash talk!
Hannah also gave a great flash talk!
Reposted by RevathyKrishnamurthy
Please go check out poster B070 #Microbio2025 by @deuskamya.bsky.social on understanding phage resistance development in Klebsiella
April 2, 2025 at 12:50 PM
Please go check out poster B070 #Microbio2025 by @deuskamya.bsky.social on understanding phage resistance development in Klebsiella
Reposted by RevathyKrishnamurthy
After being quiet for a while-I'm back on @bsky.app! 🎉 To kick-start my return, today I'll be presenting my work with @ukhsa.bsky.social on #typhoidal #Salmonella at #MicroBio25! Pop by poster 301 for exciting insights into enteric fever, including some innovative analysis on bacterial carriers! 🦠
April 2, 2025 at 10:55 AM
After being quiet for a while-I'm back on @bsky.app! 🎉 To kick-start my return, today I'll be presenting my work with @ukhsa.bsky.social on #typhoidal #Salmonella at #MicroBio25! Pop by poster 301 for exciting insights into enteric fever, including some innovative analysis on bacterial carriers! 🦠
Reposted by RevathyKrishnamurthy
🎓 #PhDPosition available in my group!
🫁 Understanding the microbiome and phageome in chronic lung infections for the development of phage therapy with me & Prof Eleanor Mishra
📅 Apply by Monday 14 April
➡️ buff.ly/7v9JVDU
Happy to answer questions, but don't send your CV through email.
🫁 Understanding the microbiome and phageome in chronic lung infections for the development of phage therapy with me & Prof Eleanor Mishra
📅 Apply by Monday 14 April
➡️ buff.ly/7v9JVDU
Happy to answer questions, but don't send your CV through email.
March 19, 2025 at 11:11 AM
🎓 #PhDPosition available in my group!
🫁 Understanding the microbiome and phageome in chronic lung infections for the development of phage therapy with me & Prof Eleanor Mishra
📅 Apply by Monday 14 April
➡️ buff.ly/7v9JVDU
Happy to answer questions, but don't send your CV through email.
🫁 Understanding the microbiome and phageome in chronic lung infections for the development of phage therapy with me & Prof Eleanor Mishra
📅 Apply by Monday 14 April
➡️ buff.ly/7v9JVDU
Happy to answer questions, but don't send your CV through email.
Reposted by RevathyKrishnamurthy
Come and learn about prophages of Ruminococcus gnavus from @xenadyball.bsky.social at poster B078 #Microbio2025
April 2, 2025 at 1:05 PM
Come and learn about prophages of Ruminococcus gnavus from @xenadyball.bsky.social at poster B078 #Microbio2025
Reposted by RevathyKrishnamurthy
Fleming Prize Lecture winner, Professor Cesar de la Fuente is presenting their lecture AI for Antibiotic Discovery, at 18:15 BST in Hall 1. Read more about the prize winner - microb.io/ProfCesardel...
April 2, 2025 at 4:05 PM
Fleming Prize Lecture winner, Professor Cesar de la Fuente is presenting their lecture AI for Antibiotic Discovery, at 18:15 BST in Hall 1. Read more about the prize winner - microb.io/ProfCesardel...
Reposted by RevathyKrishnamurthy
My favorite NPR story blog - “Goats and Soda” sent a writer and photographer to a rural school in India; an early adopter of Foldscope. A wonderful photo story of kids “reading nature”. In this current challenging climate - the kids show us the way with joy and wonder.
www.npr.org/sections/goa...
www.npr.org/sections/goa...
November 24, 2024 at 4:55 PM
My favorite NPR story blog - “Goats and Soda” sent a writer and photographer to a rural school in India; an early adopter of Foldscope. A wonderful photo story of kids “reading nature”. In this current challenging climate - the kids show us the way with joy and wonder.
www.npr.org/sections/goa...
www.npr.org/sections/goa...
10.1093/nar/gkaf113 Yet another evidence of prophages rewiring host transcription network. It feels really great to see the puzzle unfolding from where I left! Great work Dr.Iwona Mruk and team.
March 6, 2025 at 8:58 AM
10.1093/nar/gkaf113 Yet another evidence of prophages rewiring host transcription network. It feels really great to see the puzzle unfolding from where I left! Great work Dr.Iwona Mruk and team.
Reposted by RevathyKrishnamurthy
I'm very happy to report that Matt Schechter's PhD work is now online as a pre-print:
"Ribosomal protein phylogeography offers quantitative insights into the efficacy of genome-resolved surveys of microbial communities", www.biorxiv.org/content/10.1...
Here's a little 🧵 about it.
"Ribosomal protein phylogeography offers quantitative insights into the efficacy of genome-resolved surveys of microbial communities", www.biorxiv.org/content/10.1...
Here's a little 🧵 about it.
January 17, 2025 at 3:31 PM
I'm very happy to report that Matt Schechter's PhD work is now online as a pre-print:
"Ribosomal protein phylogeography offers quantitative insights into the efficacy of genome-resolved surveys of microbial communities", www.biorxiv.org/content/10.1...
Here's a little 🧵 about it.
"Ribosomal protein phylogeography offers quantitative insights into the efficacy of genome-resolved surveys of microbial communities", www.biorxiv.org/content/10.1...
Here's a little 🧵 about it.
Reposted by RevathyKrishnamurthy
If you have been using #anvio to analyze your microbial pangenomes, we have a new program for you to calculate rarefaction curves or Heaps' Law fit for your gene clusters:
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
March 2, 2025 at 3:13 PM
If you have been using #anvio to analyze your microbial pangenomes, we have a new program for you to calculate rarefaction curves or Heaps' Law fit for your gene clusters:
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
anvio.org/help/main/pr...
Sorry it took this long :/ But at least t will run on any existing anvi'o pangenome :)
It was a great and long first day at IBSE symposium today. That's a great well received talk by @evelienadri.bsky.social today making my poster session so easy! I had a great time learning about the microbiome of various ecosystem from rhizosphere to Ocean! Gearing up for flash talk tomorrow!
February 19, 2025 at 5:16 PM
It was a great and long first day at IBSE symposium today. That's a great well received talk by @evelienadri.bsky.social today making my poster session so easy! I had a great time learning about the microbiome of various ecosystem from rhizosphere to Ocean! Gearing up for flash talk tomorrow!
It feels great to be able to present my work that I cherish everyday with @evelienadri.bsky.social in 5th IBSE International Symposium (ibse.iitm.ac.in/symposium-05/) @IIT,Chennai, my home. If any of you are in and around please find me with my poster S2-8 to know more about Early Human Gut Virome.
5th IBSE International Symposium
ibse.iitm.ac.in
February 18, 2025 at 11:43 AM
It feels great to be able to present my work that I cherish everyday with @evelienadri.bsky.social in 5th IBSE International Symposium (ibse.iitm.ac.in/symposium-05/) @IIT,Chennai, my home. If any of you are in and around please find me with my poster S2-8 to know more about Early Human Gut Virome.
January 14, 2025 at 6:04 PM
This is going to be great and exciting opportunity for those who are interested in Molecular Nematology! Check it out!
December 19, 2024 at 7:37 AM
This is going to be great and exciting opportunity for those who are interested in Molecular Nematology! Check it out!
Reposted by RevathyKrishnamurthy
Grateful to the Swedish Research Council (Vetenskapsrådet) for funding a 3 year project on antibiotic resistance & phages in my group. If you're looking for a post-doc position in 2025, have a phagey background, & are interested in combining wet and dry research then keep a look out for an ad soon!
December 3, 2024 at 2:30 PM
Grateful to the Swedish Research Council (Vetenskapsrådet) for funding a 3 year project on antibiotic resistance & phages in my group. If you're looking for a post-doc position in 2025, have a phagey background, & are interested in combining wet and dry research then keep a look out for an ad soon!
Reposted by RevathyKrishnamurthy
November 19, 2024 at 4:30 PM