Rongxin Fang, Ph.D.
@r3fang.bsky.social
Incoming Assistant Professor at Stanford | Postdoc in microscopy with Xiaowei Zhuang at Harvard | Former Ph.D. in genomics with Bing Ren at UCSanDiego | fanglabstanford.org
Pinned
Rongxin Fang, Ph.D.
@r3fang.bsky.social
· Nov 25
I will be starting my lab at Stanford in 2025. We are looking for talented postdocs / grad students to join us to develop single cell sequencing, spatial genomics, machine learning, functional genomics, live cell imaging tools to understand the cell communication across space and time. Please RT!Thx
It is my great honor to join the amazing NGL cohort at
@alleninstitute.bsky.social. I am very much looking forward to connecting and collaborating with everyone in the future!
@alleninstitute.bsky.social. I am very much looking forward to connecting and collaborating with everyone in the future!
Congrats to:
@ismail-ahmed.bsky.social
@azaallsop.bsky.social al
Jessica Butts
@r3fang.bsky.social y.social
@kevinkelley.bsky.social sky.social
Mariajose Metcalfe
@droligo.bsky.social y.social
Fan Zhang
Read the full announcement: alleninstitute.org/news/allen-i...
@ismail-ahmed.bsky.social
@azaallsop.bsky.social al
Jessica Butts
@r3fang.bsky.social y.social
@kevinkelley.bsky.social sky.social
Mariajose Metcalfe
@droligo.bsky.social y.social
Fan Zhang
Read the full announcement: alleninstitute.org/news/allen-i...
Allen Institute announces 2024 Next Generation Leaders
This year, the program has expanded beyond neuroscience to welcome researchers from the fields of bioengineering, chemistry, and medicine.
alleninstitute.org
December 19, 2024 at 4:37 PM
It is my great honor to join the amazing NGL cohort at
@alleninstitute.bsky.social. I am very much looking forward to connecting and collaborating with everyone in the future!
@alleninstitute.bsky.social. I am very much looking forward to connecting and collaborating with everyone in the future!
Reposted by Rongxin Fang, Ph.D.
#FirstPost
Happy to announce that our research group is moving from UCLA to UPenn in the Dept of Genetics and Institute of Biomedical Informatics at Perelman School of Medicine!
So thankful to the amazing UCLA community for 12 wonderful years! #BruinForever
Excited for new adventures in Philly!
Happy to announce that our research group is moving from UCLA to UPenn in the Dept of Genetics and Institute of Biomedical Informatics at Perelman School of Medicine!
So thankful to the amazing UCLA community for 12 wonderful years! #BruinForever
Excited for new adventures in Philly!
November 28, 2024 at 3:07 PM
#FirstPost
Happy to announce that our research group is moving from UCLA to UPenn in the Dept of Genetics and Institute of Biomedical Informatics at Perelman School of Medicine!
So thankful to the amazing UCLA community for 12 wonderful years! #BruinForever
Excited for new adventures in Philly!
Happy to announce that our research group is moving from UCLA to UPenn in the Dept of Genetics and Institute of Biomedical Informatics at Perelman School of Medicine!
So thankful to the amazing UCLA community for 12 wonderful years! #BruinForever
Excited for new adventures in Philly!
Reposted by Rongxin Fang, Ph.D.
"The lives of cells, recorded"--our new review on genomic recording systems and how they can reveal the dynamics of multicellular development. A pleasure to work on this with amazing colleagues from the Allen Discovery Center for Cell Lineage Tracing.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
The lives of cells, recorded - Nature Reviews Genetics
Recent advances in genome engineering are enabling the recording of cellular histories into genomes, with single-cell and spatial omics technologies enabling their reconstruction into cellular lineage...
www.nature.com
November 25, 2024 at 5:29 PM
"The lives of cells, recorded"--our new review on genomic recording systems and how they can reveal the dynamics of multicellular development. A pleasure to work on this with amazing colleagues from the Allen Discovery Center for Cell Lineage Tracing.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Targeted ST pre-selects 100s cell type marker genes. This can exaggerate diff between types while lacks continuity within types. Spapros - probe design pipeline - selects the minimal set of genes to recover both cell type identification and within-type variation.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Probe set selection for targeted spatial transcriptomics - Nature Methods
Spapros is a probe set selection pipeline for targeted spatial transcriptomics that optimizes for both transcriptional and within-cell type variation.
www.nature.com
November 25, 2024 at 2:48 PM
Targeted ST pre-selects 100s cell type marker genes. This can exaggerate diff between types while lacks continuity within types. Spapros - probe design pipeline - selects the minimal set of genes to recover both cell type identification and within-type variation.
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Array-seq: A microarray and NGS-based method for genome-scale spatial transcriptomic (ST) profiling at high resolution (10s micrometers) with high throughput (organ-scale).
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Repurposing large-format microarrays for scalable spatial transcriptomics - Nature Methods
Array-seq repurposes microarray slides for high-sensitivity, scalable spatial transcriptomics.
www.nature.com
November 25, 2024 at 2:46 PM
Array-seq: A microarray and NGS-based method for genome-scale spatial transcriptomic (ST) profiling at high resolution (10s micrometers) with high throughput (organ-scale).
www.nature.com/articles/s41...
www.nature.com/articles/s41...
I will be starting my lab at Stanford in 2025. We are looking for talented postdocs / grad students to join us to develop single cell sequencing, spatial genomics, machine learning, functional genomics, live cell imaging tools to understand the cell communication across space and time. Please RT!Thx
November 25, 2024 at 2:45 PM
I will be starting my lab at Stanford in 2025. We are looking for talented postdocs / grad students to join us to develop single cell sequencing, spatial genomics, machine learning, functional genomics, live cell imaging tools to understand the cell communication across space and time. Please RT!Thx