phy_papers
@phypapers.bsky.social
Continuous feed for phylogenetics papers from PubMed, arXiv, bioRxiv, and EcoEvoRxiv. Run by @roblanfear.bsky.social
Make your own literature bot with these instructions: https://github.com/roblanf/phypapers
Make your own literature bot with these instructions: https://github.com/roblanf/phypapers
FullSynesth: Syntenic Reconciliation of a Set of Consistent Gene Trees https://pubmed.ncbi.nlm.nih.gov/41684729/
February 14, 2026 at 5:21 AM
FullSynesth: Syntenic Reconciliation of a Set of Consistent Gene Trees https://pubmed.ncbi.nlm.nih.gov/41684729/
The complete chloroplast genome of Calophyllum membranaceum Gander & Champ 1849 (Calophyllaceae, Malpighiales) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41675940/
February 14, 2026 at 5:04 AM
The complete chloroplast genome of Calophyllum membranaceum Gander & Champ 1849 (Calophyllaceae, Malpighiales) and its phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41675940/
Complete mitochondrial genome and phylogenetic analysis of the sea anemone Heteractis doreensis (Quoy & Gaimard, 1833) https://pubmed.ncbi.nlm.nih.gov/41675941/
February 14, 2026 at 4:47 AM
Complete mitochondrial genome and phylogenetic analysis of the sea anemone Heteractis doreensis (Quoy & Gaimard, 1833) https://pubmed.ncbi.nlm.nih.gov/41675941/
Taxonomic novelties and phylogenetic insights into Cainiaceae (Xylariales, Sordariomycetes) associated with Poaceae hosts from Southwestern China https://pubmed.ncbi.nlm.nih.gov/41676238/
February 14, 2026 at 4:30 AM
Taxonomic novelties and phylogenetic insights into Cainiaceae (Xylariales, Sordariomycetes) associated with Poaceae hosts from Southwestern China https://pubmed.ncbi.nlm.nih.gov/41676238/
Modular automated high-throughput isolation and phylogenetic identification of bacteria from complex microbiomes https://pubmed.ncbi.nlm.nih.gov/41676442/
February 14, 2026 at 4:13 AM
Modular automated high-throughput isolation and phylogenetic identification of bacteria from complex microbiomes https://pubmed.ncbi.nlm.nih.gov/41676442/
Assembly, Characterization, and Phylogenetic Insights from the Complete Mitochondrial Genome of Cleisthenes herzensteini (Pleuronectiformes: Pleuronectidae) https://pubmed.ncbi.nlm.nih.gov/41677686/
February 14, 2026 at 3:56 AM
Assembly, Characterization, and Phylogenetic Insights from the Complete Mitochondrial Genome of Cleisthenes herzensteini (Pleuronectiformes: Pleuronectidae) https://pubmed.ncbi.nlm.nih.gov/41677686/
First Plastome Sequences of Two Endemic Taxa of Orbea Haw. from the Arabian Peninsula: Comparative Genomics and Phylogenetic Relationships Within the Tribe Ceropegieae (Asclepiadoideae, Apocynaceae) https://pubmed.ncbi.nlm.nih.gov/41677694/
February 14, 2026 at 3:39 AM
First Plastome Sequences of Two Endemic Taxa of Orbea Haw. from the Arabian Peninsula: Comparative Genomics and Phylogenetic Relationships Within the Tribe Ceropegieae (Asclepiadoideae, Apocynaceae) https://pubmed.ncbi.nlm.nih.gov/41677694/
Integrative Taxonomy of Nuchequula longicornis (Teleostei: Leiognathidae) from Chinese Waters: Morphological Analysis, Mitogenomic Characterization, and Phylogenetic Implications https://pubmed.ncbi.nlm.nih.gov/41677731/
February 14, 2026 at 3:22 AM
Integrative Taxonomy of Nuchequula longicornis (Teleostei: Leiognathidae) from Chinese Waters: Morphological Analysis, Mitogenomic Characterization, and Phylogenetic Implications https://pubmed.ncbi.nlm.nih.gov/41677731/
Associations of Biotic and Abiotic Factors with Phylogenetic Community Structure Across Temperate Forests in South Korea https://pubmed.ncbi.nlm.nih.gov/41677739/
February 14, 2026 at 3:05 AM
Associations of Biotic and Abiotic Factors with Phylogenetic Community Structure Across Temperate Forests in South Korea https://pubmed.ncbi.nlm.nih.gov/41677739/
Molecular detection and phylogenetic characterization of tick-borne pathogens in Anatolian water buffalo (Bubalus bubalis) https://pubmed.ncbi.nlm.nih.gov/41677960/
February 14, 2026 at 2:47 AM
Molecular detection and phylogenetic characterization of tick-borne pathogens in Anatolian water buffalo (Bubalus bubalis) https://pubmed.ncbi.nlm.nih.gov/41677960/
Phylogenetic evidence reveals the classification and evolutionary history of endemic cavefish in China https://pubmed.ncbi.nlm.nih.gov/41680615/
February 14, 2026 at 2:30 AM
Phylogenetic evidence reveals the classification and evolutionary history of endemic cavefish in China https://pubmed.ncbi.nlm.nih.gov/41680615/
The Complete Chloroplast Genomic Characteristics and Phylogenetic Analysis of Abutilon theophrasti Medicus https://pubmed.ncbi.nlm.nih.gov/41683633/
February 14, 2026 at 2:13 AM
The Complete Chloroplast Genomic Characteristics and Phylogenetic Analysis of Abutilon theophrasti Medicus https://pubmed.ncbi.nlm.nih.gov/41683633/
A phylogenomic and metagenomic meta-analysis of bacterial diversity in the phyllosphere lifts a veil on hyphomicrobiales dark matter https://pubmed.ncbi.nlm.nih.gov/41679088/
February 14, 2026 at 1:56 AM
A phylogenomic and metagenomic meta-analysis of bacterial diversity in the phyllosphere lifts a veil on hyphomicrobiales dark matter https://pubmed.ncbi.nlm.nih.gov/41679088/
Integrating morphology and phylogenetics reveals new species, records, and provides an updated checklist of Trichiaceae in China https://pubmed.ncbi.nlm.nih.gov/41678401/
February 14, 2026 at 1:39 AM
Integrating morphology and phylogenetics reveals new species, records, and provides an updated checklist of Trichiaceae in China https://pubmed.ncbi.nlm.nih.gov/41678401/
Plant Molecular Phylogenetics and Evolutionary Genomics III https://pubmed.ncbi.nlm.nih.gov/41681526/
February 14, 2026 at 1:22 AM
Plant Molecular Phylogenetics and Evolutionary Genomics III https://pubmed.ncbi.nlm.nih.gov/41681526/
Revision of Ambisporaceae, with three new genera and one new species and a morphological identification key for all the species currently attributed to this family https://www.biorxiv.org/content/10.64898/2026.02.11.705428v1
February 14, 2026 at 1:05 AM
Revision of Ambisporaceae, with three new genera and one new species and a morphological identification key for all the species currently attributed to this family https://www.biorxiv.org/content/10.64898/2026.02.11.705428v1
Viromics in flat mites from Hawaii shows abundant arrays of viruses, expands the evolutionary origin of plant viruses, and provides a surveillance tool for Brevipalpus-transmitted viruses https://www.biorxiv.org/content/10.64898/2026.02.11.705406v1
February 14, 2026 at 12:48 AM
Viromics in flat mites from Hawaii shows abundant arrays of viruses, expands the evolutionary origin of plant viruses, and provides a surveillance tool for Brevipalpus-transmitted viruses https://www.biorxiv.org/content/10.64898/2026.02.11.705406v1
Ribonucleotide reductases recapitulate biogeographic patterns within virioplankton according to ocean biogeochemistry https://www.biorxiv.org/content/10.64898/2026.02.11.705308v1
February 14, 2026 at 12:31 AM
Ribonucleotide reductases recapitulate biogeographic patterns within virioplankton according to ocean biogeochemistry https://www.biorxiv.org/content/10.64898/2026.02.11.705308v1
Distinct core minor pilin complexes prime specialized type IV filaments in cyanobacteria https://www.biorxiv.org/content/10.64898/2026.02.12.705559v1
February 14, 2026 at 12:14 AM
Distinct core minor pilin complexes prime specialized type IV filaments in cyanobacteria https://www.biorxiv.org/content/10.64898/2026.02.12.705559v1
Ecogenomic Diversity of Clavibacter nebraskensis in North America https://www.biorxiv.org/content/10.64898/2026.02.11.705226v1
February 13, 2026 at 11:57 PM
Ecogenomic Diversity of Clavibacter nebraskensis in North America https://www.biorxiv.org/content/10.64898/2026.02.11.705226v1
Divergent disulfide bond architecture defines two IgY subclasses in snakes https://www.biorxiv.org/content/10.64898/2026.02.11.705265v1
February 13, 2026 at 11:40 PM
Divergent disulfide bond architecture defines two IgY subclasses in snakes https://www.biorxiv.org/content/10.64898/2026.02.11.705265v1
Splicer: Phylogenetic Placement in Sub-Linear Time https://www.biorxiv.org/content/10.64898/2026.02.10.705130v1
February 13, 2026 at 11:23 PM
Splicer: Phylogenetic Placement in Sub-Linear Time https://www.biorxiv.org/content/10.64898/2026.02.10.705130v1
Unusual molecular architecture of a human gut microbiota beta-mannanase reveals a new CBM family https://www.biorxiv.org/content/10.64898/2026.02.11.704390v1
February 13, 2026 at 11:06 PM
Unusual molecular architecture of a human gut microbiota beta-mannanase reveals a new CBM family https://www.biorxiv.org/content/10.64898/2026.02.11.704390v1
Emergence of hypervirulent and carbapenem-resistant Klebsiella pneumoniae ST37: genomic and phenotypic characterization of virulence and resistance https://pubmed.ncbi.nlm.nih.gov/41668889/
February 13, 2026 at 9:06 PM
Emergence of hypervirulent and carbapenem-resistant Klebsiella pneumoniae ST37: genomic and phenotypic characterization of virulence and resistance https://pubmed.ncbi.nlm.nih.gov/41668889/
Case Report: Mixed ductal-lobular carcinoma consisting of invasive lobular carcinoma with a glycogen-rich clear cell pattern and elevated tumor mutation burden https://pubmed.ncbi.nlm.nih.gov/41669107/
February 13, 2026 at 8:38 PM
Case Report: Mixed ductal-lobular carcinoma consisting of invasive lobular carcinoma with a glycogen-rich clear cell pattern and elevated tumor mutation burden https://pubmed.ncbi.nlm.nih.gov/41669107/