Moldyn Freiburg
@moldynfr.bsky.social
We are the Stock research group from the Institute of Physics of the University of Freiburg. Interested in biological physics, model building and data analysis.
Newest work from Sofia, Franziska and Gerhard: an assessment how far state models similar to MSMs can describe non-Markovian dynamics. Out now as preprint under: arxiv.org/abs/2412.08660 #compchem
Markov-type state models to describe non-Markovian dynamics
When clustering molecular dynamics (MD) trajectories into a few metastable conformational states, the Markov state models (MSMs) assumption of timescale separation between fast intrastate fluctuations...
arxiv.org
December 13, 2024 at 12:50 PM
Newest work from Sofia, Franziska and Gerhard: an assessment how far state models similar to MSMs can describe non-Markovian dynamics. Out now as preprint under: arxiv.org/abs/2412.08660 #compchem
Reposted by Moldyn Freiburg
Come to our CECAM workshop in March 2025 at Lausanne!
If you are a fan of ligand binding kinetics, come to the CECAM workshop that @herrflow.bsky.social, Rebecca Wade, Giovanni Bottegoni and I are organizing next year in Lausanne. The registration deadline is January 10, hurry up!
#compchem
www.cecam.org/workshop-det...
#compchem
www.cecam.org/workshop-det...
December 6, 2024 at 8:16 AM
Come to our CECAM workshop in March 2025 at Lausanne!
Newest work of our group: Ahmed, Emanuel and Gerhard report on how allosteric information is transmitted via coupling of contact clusters within proteins. #compchem #allostery #biophysics #ai pubs.acs.org/doi/10.1021/...
Allosteric Communication Mediated by Protein Contact Clusters: A Dynamical Model
Describing the puzzling phenomenon of long-range communication between distant protein sites, allostery is of paramount importance in biomolecular regulation and signal transduction. It is commonly as...
pubs.acs.org
December 3, 2024 at 9:04 AM
Newest work of our group: Ahmed, Emanuel and Gerhard report on how allosteric information is transmitted via coupling of contact clusters within proteins. #compchem #allostery #biophysics #ai pubs.acs.org/doi/10.1021/...
...and we're here now, too! Looking forward to post about science and general stuff from now on.
November 28, 2024 at 9:22 PM
...and we're here now, too! Looking forward to post about science and general stuff from now on.