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germinate.hutton.ac.uk
Germinate Hub
@germinate.hutton.ac.uk
Germinate provides a fully featured open-source plant genetic resources platform #germinate #bioinformatics #pgr

https://ics.hutton.ac.uk/get-germinate
Reposted by Germinate Hub
The @hutton.ac.uk Best Crop Project team produced very cool stickers to promote our work using the Germinate database.
Find out more here: germinateplatform.github.io/get-germinate/
November 3, 2025 at 2:37 PM
Reposted by Germinate Hub
We've just released a new version of @germinate.hutton.ac.uk with lots of new features. Check them out in the thread 🧵:
#pgr #webdev #boldcwr #phenotyping

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germinate.hutton.ac.uk
August 14, 2025 at 12:47 PM
Reposted by Germinate Hub
This release also fixes issues on iOS devices where date-based traits sometimes auto-selected the current date. This is an iOS issue, but a new setting to prevent auto progression prevents this.
We have also fixed issues with trait deletion and export format issues.
a man is holding a hammer and the words bug are on the screen
ALT: a man is holding a hammer and the words bug are on the screen
media.tenor.com
June 5, 2025 at 9:41 AM
Reposted by Germinate Hub
When exporting in the long-format, you can now include more information about each individual data point. This includes a full timestamp (rather than just the date), the position of this measurement in the set and the person who collected each data point.

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June 5, 2025 at 9:41 AM
Reposted by Germinate Hub
Add even more information to each plot by providing treatment, pedigree or a friendly name.
These provide more information to the person collecting the data.

You can also assign a dedicated barcode for each plot that isn't the same as the germplasm name! This helps keep barcode tags shorter.

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June 5, 2025 at 9:41 AM
Reposted by Germinate Hub
It's update day for #GridScore 🎉
This release includes improvements to:
📝 Add pedigree, treatment, friendly name and barcode info to plots
💾 Include more information in long-format exports
🍎 Prevent automatic date selection on iOS devices
🐞 Bugfixes

#phenotyping #BOLDcwr
gridscore.hutton.ac.uk

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June 5, 2025 at 9:41 AM
Reposted by Germinate Hub
We've been working on a small tool for vegetation index estimation from RGB images called Spriggles

🔲 Select area of interest
📝 Export into Excel
📑 If images are taken with #GridScore, export your data straight back into the GridScore trial

#phenotyping #webdev #rse

cropgeeks.github.io/spriggles
May 27, 2025 at 10:23 AM
Reposted by Germinate Hub
First signs of germination!
#seeds #potato #biodiversity
April 11, 2025 at 8:01 AM
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April 4, 2025 at 8:02 AM
@pauldshaw.bsky.social speaks at the #BreedingValue workshop on advanced #berry breeding and the important part #Germinate plays in the data aggregation and distribution.
April 2, 2025 at 4:15 PM
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Follow along this season for an exclusive behind-the-scenes look at the inner workings of the Commonwealth Potato Collection.
March 12, 2025 at 11:05 AM
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March 21, 2025 at 8:55 AM
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March 28, 2025 at 8:52 AM
Reposted by Germinate Hub
The update is here! Now you can score two plots at a time, export any visualization to PNG and SVG format, utilise barcodes even better and export more data via #BrAPI

#phenotyping #bioinformatics #webdev

gridscore.hutton.ac.uk
February 26, 2025 at 1:27 PM
Today, we're releasing a new version of #Germinate with a long list of improvements focusing on trait definitions, trait data visualization, project support and general user experience improvements.
#pgr #bioinformatics

germinate.hutton.ac.uk

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January 30, 2025 at 2:22 PM
Reposted by Germinate Hub
Learn more about the work we are doing at The James Hutton Institute as part of the EU funded BREEDING VALUE project. Here @bazraubach.bsky.social talks about the work he is doing to help fruit researches store their experiemtal data using @germinate.hutton.ac.uk.

breedingvalue.eu/the-germinat...
January 20, 2025 at 2:35 PM
Reposted by Germinate Hub
Join our #BreedingValue webinar tomorrow morning at 9:30am GMT where @bazraubach.bsky.social will talk about the work we have been doing at @jameshuttoninst.bsky.social on creating a central @germinate.hutton.ac.uk database to store experiemental data. More info www.breedingvalue.eu/news/webinar...
November 25, 2024 at 2:42 PM