Ellis Patrick
@ellispatrick.bsky.social
Statistical Bioinformagician with interests in cytometry and precision medicine.
Associate Professor at the University of Sydney, Sydney Precision Data Science Centre, and Westmead Institute for Medical Research.
https://ellispatrick.github.io/
Associate Professor at the University of Sydney, Sydney Precision Data Science Centre, and Westmead Institute for Medical Research.
https://ellispatrick.github.io/
I’m really chuffed to have been awarded the SUPRA Supervisor of the Year 2025 for the Faculty of Science. Big thanks to my students for nominating me! Your energy, curiosity and drive make supervision the most rewarding part of my role :)
September 25, 2025 at 1:02 AM
I’m really chuffed to have been awarded the SUPRA Supervisor of the Year 2025 for the Faculty of Science. Big thanks to my students for nominating me! Your energy, curiosity and drive make supervision the most rewarding part of my role :)
Reposted by Ellis Patrick
Interested in spatial statistics for spatial omics data? Check out our new resource: pasta.
We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!
arxiv.org/abs/2412.01561
We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!
arxiv.org/abs/2412.01561
pasta: Pattern Analysis for Spatial Omics Data
Spatial omics assays allow for the molecular characterisation of cells in their spatial context. Notably, the two main technological streams, imaging-based and high-throughput sequencing-based, can gi...
arxiv.org
December 4, 2024 at 12:14 PM
Interested in spatial statistics for spatial omics data? Check out our new resource: pasta.
We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!
arxiv.org/abs/2412.01561
We show how different technologies lead to different data modalities give and overview of point-pattern and lattice-based spatial analysis. Feedback welcome!
arxiv.org/abs/2412.01561
I'm feeling pretty excited to have a month off over xmas relaxing at the beach.
I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(
I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(
December 4, 2024 at 8:26 PM
I'm feeling pretty excited to have a month off over xmas relaxing at the beach.
I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(
I just realised this morning that that month off starts in two weeks! There is no way I'm going to be able to leave my laptop at home this year :(
Reposted by Ellis Patrick
Reupping this since the explosion in members here.
I’m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details 👇 Please share 😁
www.flinders.edu.au/scholarships...
I’m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details 👇 Please share 😁
www.flinders.edu.au/scholarships...
PhD scholarship in bioinformatics - Flinders University
www.flinders.edu.au
November 28, 2024 at 5:23 AM
Reupping this since the explosion in members here.
I’m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details 👇 Please share 😁
www.flinders.edu.au/scholarships...
I’m looking to recruit PhD candidates to work with me in #Bioinformatics and thr human #microbiome Details 👇 Please share 😁
www.flinders.edu.au/scholarships...
Reposted by Ellis Patrick
Kicking off our Bluesky life by announcing our Statistical Bioinformatics Seminar Judith & David Coffey Invited Speaker. Mon 25/11 Professor Stephen Leslie, Indigenous Australian genomes show deep population structure and abundant novel variation. Online and @ USyd spds.sydney.edu.au/event/specia...
November 21, 2024 at 2:57 AM
Kicking off our Bluesky life by announcing our Statistical Bioinformatics Seminar Judith & David Coffey Invited Speaker. Mon 25/11 Professor Stephen Leslie, Indigenous Australian genomes show deep population structure and abundant novel variation. Online and @ USyd spds.sydney.edu.au/event/specia...
Reposted by Ellis Patrick
Amazing #BiocAsia2024 event! Thanks to all who participated!
Looking forward to next year!
@bioconductor.bsky.social
Looking forward to next year!
@bioconductor.bsky.social
November 11, 2024 at 8:19 AM
Amazing #BiocAsia2024 event! Thanks to all who participated!
Looking forward to next year!
@bioconductor.bsky.social
Looking forward to next year!
@bioconductor.bsky.social
Had such a great time at EuroBioC2024, awesome talks and met some amazing people! Definitely keeping an eye on #EuroBioC2025!
@bioconductor.bsky.social #Bioconductor #Bioinformatics
@bioconductor.bsky.social #Bioconductor #Bioinformatics
European Bioconductor Conference (EuroBioC2025):
17-19 September 2025 in Barcelona!
eurobioc2025.bioconductor.org
17-19 September 2025 in Barcelona!
eurobioc2025.bioconductor.org
November 19, 2024 at 8:06 PM
Had such a great time at EuroBioC2024, awesome talks and met some amazing people! Definitely keeping an eye on #EuroBioC2025!
@bioconductor.bsky.social #Bioconductor #Bioinformatics
@bioconductor.bsky.social #Bioconductor #Bioinformatics
Ellis' learning of the day. The base R pipe has a placeholder!
link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"
link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"
November 19, 2024 at 5:47 AM
Ellis' learning of the day. The base R pipe has a placeholder!
link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"
link = " is "
link |> paste("Ellis", "dumb", sep = _)
[1] "Ellis is dumb"
Reposted by Ellis Patrick
Academic writing — get utilized to it.
November 14, 2024 at 12:49 PM
Academic writing — get utilized to it.
Pro-tip for anyone that attended COMBINE yesterday... You can make your name tag double-sided by slotting your COMBINE name tag into the ABACBS name tag. Saves the awkward flick of the name tag when you introduce yourself to someone new! #abacbs23 #abacbs2023
December 4, 2023 at 9:01 PM
Pro-tip for anyone that attended COMBINE yesterday... You can make your name tag double-sided by slotting your COMBINE name tag into the ABACBS name tag. Saves the awkward flick of the name tag when you introduce yourself to someone new! #abacbs23 #abacbs2023
Good morning Brisbane! #ABACBS23 #ABACBS2023
December 4, 2023 at 7:30 PM
Good morning Brisbane! #ABACBS23 #ABACBS2023
Reposted by Ellis Patrick
Bioinformatics wisdom of the day:
When there are too many methods for the same task, you know that none of them is very good.
When there are too many methods for the same task, you know that none of them is very good.
November 15, 2023 at 10:57 AM
Bioinformatics wisdom of the day:
When there are too many methods for the same task, you know that none of them is very good.
When there are too many methods for the same task, you know that none of them is very good.