Cameron Martino
@cameronmartino.bsky.social
Microbiology x Math + Pizza
Current: Leaven Foods
Former: Native Microbials, PhD @ UCSD w/ Rob Knight.
Current: Leaven Foods
Former: Native Microbials, PhD @ UCSD w/ Rob Knight.
Pinned
TEMPTED: time-informed dimensionality reduction for longitudinal microbiome studies - Genome Biology
Longitudinal studies are crucial for understanding complex microbiome dynamics and their link to health. We introduce TEMPoral TEnsor Decomposition (TEMPTED), a time-informed dimensionality reduction ...
genomebiology.biomedcentral.com
New tensor factorization paper out today — a fun collaboration with Pixu Shi, Liat Shenhav, Rob Knight, & Anru_Zhang! 🎉 Check it out here: genomebiology.biomedcentral.com/articles/10....
Congrats Rodolfo & Nina et al! Nothing is more gratifying than to see your tool be useful for such a cool study like this one. 🛰️
The #InternationalSpaceStation is overly sterile; making it “dirtier” could improve astronaut health, microbiologists say. cell.com/cell/fulltex...
Learn more in @cp-cell.bsky.social
@pieterdorrestein.bsky.social, Rob Knight
Learn more in @cp-cell.bsky.social
@pieterdorrestein.bsky.social, Rob Knight
The International Space Station has a unique and extreme microbial and chemical environment driven by use patterns
With long-term space travel and extraterrestrial habitation becoming feasible, understanding
how space environmental exposures, microbial communities, and molecular profiles differ
from Earth is cruci...
cell.com
February 27, 2025 at 8:19 PM
Congrats Rodolfo & Nina et al! Nothing is more gratifying than to see your tool be useful for such a cool study like this one. 🛰️
In summary, if you're looking for a great time, this paper has everything: virology, glycobiology, microbiology, metabolic models, epidemiology….
February 26, 2025 at 11:41 PM
In summary, if you're looking for a great time, this paper has everything: virology, glycobiology, microbiology, metabolic models, epidemiology….
🔥 Finally published in mBio @asm.org! An update from the 2020 pre-print: “SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx.” 🔗https://journals.asm.org/doi/10.1128/mbio.04015-24 🧵👇
February 26, 2025 at 11:40 PM
🔥 Finally published in mBio @asm.org! An update from the 2020 pre-print: “SARS-CoV-2 infectivity can be modulated through bacterial grooming of the glycocalyx.” 🔗https://journals.asm.org/doi/10.1128/mbio.04015-24 🧵👇
Reposted by Cameron Martino
So happy our paper made the list!
It's that end of the year time when we count down some of our most impactful articles published in 2024 (in terms of @altmetric.com score). Here's numbers 10 to 6.
No.10 This Perspective on the changing metabolic landscape of bile acids
www.nature.com/articles/s41...
#Gastrosky #LiverSky 🦠
No.10 This Perspective on the changing metabolic landscape of bile acids
www.nature.com/articles/s41...
#Gastrosky #LiverSky 🦠
The changing metabolic landscape of bile acids – keys to metabolism and immune regulation - Nature Reviews Gastroenterology & Hepatology
Bile acids have important roles in human metabolism and immune regulation. In this Perspective, Dorrestein and colleagues discuss the technologies and data science-related approaches that are improvin...
www.nature.com
December 30, 2024 at 7:08 PM
So happy our paper made the list!
New tensor factorization paper out today — a fun collaboration with Pixu Shi, Liat Shenhav, Rob Knight, & Anru_Zhang! 🎉 Check it out here: genomebiology.biomedcentral.com/articles/10....
TEMPTED: time-informed dimensionality reduction for longitudinal microbiome studies - Genome Biology
Longitudinal studies are crucial for understanding complex microbiome dynamics and their link to health. We introduce TEMPoral TEnsor Decomposition (TEMPTED), a time-informed dimensionality reduction ...
genomebiology.biomedcentral.com
December 19, 2024 at 8:17 PM
New tensor factorization paper out today — a fun collaboration with Pixu Shi, Liat Shenhav, Rob Knight, & Anru_Zhang! 🎉 Check it out here: genomebiology.biomedcentral.com/articles/10....