#ChromosomeLevelAssembly
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Happy to share this paper has been accepted in G3: Haplotype-resolved reference genome for Eucalyptus grandis #ReferenceGenome #ChromosomeLevelAssembly @genetics-gsa.bsky.social @jgi.doe.gov @jotlovell.bsky.social @jillwegrzyn.bsky.social academic.oup.com/g3journal/ar...
A haplotype-resolved reference genome for Eucalyptus grandis
Abstract. E. grandis is a hardwood tree used worldwide as pure species or hybrid partner to breed fast-growing plantation forestry crops that serve as feed
academic.oup.com
June 3, 2025 at 5:09 AM
jsantoyo.bsky.social
A chromosome-level genome assembly of the Peruvian Algarrobo (Neltuma pallida) provides insights on its adaptation to its unique ecological niche. #PeruvianAlgarrobo #ChromosomeLevelAssembly #G3 #Genomics
academic.oup.com/g3journal/ad...
Source: https://academic.oup.com/g3journal/advance-article-pdf/doi/10.1093/g3journal/jkae283/60964341/jkae283.pdf
December 16, 2024 at 9:40 PM
jsantoyo.bsky.social
Trypanosoma cruzi Has 32 Chromosomes: A Telomere-to-Telomere Assembly Defines Its Karyotype. #TrypanosomaCruziGenome #ChromosomeLevelAssembly #Genomics @biorxivpreprint.bsky.social‬
www.biorxiv.org/content/10.1...
June 30, 2025 at 8:31 AM
jsantoyo.bsky.social
Chromosome-level genome assembly of Pontederia cordata L. provides insights into its rapid adaptation and variation of flower colors. #PontederiaCordataGenome #ChromosomeLevelAssembly #PlantGenomics #DNAresearch
academic.oup.com/dnaresearch/...
Chromosome-level genome assembly of Pontederia cordata L. provides insights into its rapid adaptation and variation of flower colors
Abstract. Pontederia cordata L. is an aquatic ornamental plant native to the Americas, but has been widely distributed in South Asia, Australia, and Europe
academic.oup.com
February 11, 2025 at 11:13 PM
jsantoyo.bsky.social
Chromosome-level Genome Assembly and Annotation of the Arctic Moss Ptychostomum knowltonii . #ArticMossGenome #ChromosomeLevelAssembly @genomebiolevol.bsky.social 🧬
academic.oup.com/gbe/advance-...
Chromosome-level Genome Assembly and Annotation of the Arctic Moss Ptychostomum knowltonii
Abstract. The polar regions host a diverse array of moss species that have evolved to thrive extreme environments. These mosses exhibit remarkable adaptati
academic.oup.com
December 17, 2024 at 4:35 PM
jsantoyo.bsky.social
Telomere-to-telomere gapless genome assembly of the giant grouper (Epinephelus lanceolatus). #GiantGrouperGenome #ChromosomeLevelAssembly #FishGenomics #Genomics #ScientificData 🧬 🖥️
www.nature.com/articles/s41...
Telomere-to-telomere gapless genome assembly of the giant grouper (Epinephelus lanceolatus) - Scientific Data
Scientific Data - Telomere-to-telomere gapless genome assembly of the giant grouper (Epinephelus lanceolatus)
www.nature.com
December 19, 2024 at 11:06 PM
jsantoyo.bsky.social
The telomere-to-telomere gapless genome of grass carp provides insights for genetic improvement. #GrassCarpGenome #ChromosomeLevelAssembly #Genomics #Bioinformatics #FishGenetics @gigascience.bsky.social‬ 🧬 🖥️
academic.oup.com/gigascience/...
June 22, 2025 at 6:05 PM
jsantoyo.bsky.social
A high-quality assembly revealing the PMEL gene for the unique plumage phenotype in Liancheng ducks. #LianchengDucksGenome #ChromosomeLevelAssembly #PlumagePhenotype @gigascience.bsky.social
academic.oup.com/gigascience/...
A high-quality assembly revealing the PMEL gene for the unique plumage phenotype in Liancheng ducks
AbstractBackground. Plumage coloration is a distinctive trait in ducks, and the Liancheng duck, characterized by its white plumage and black beak and webbe
academic.oup.com
February 10, 2025 at 11:56 PM
jsantoyo.bsky.social
Chromosome-level genome assembly of the lemon sole, Microstomus kitt (Pleuronectiformes: Pleuronectidae). #LemonSoleGenome #ChromosomeLevelAssembly #GigaBytes
gigabytejournal.com/articles/156
June 1, 2025 at 8:31 PM
jsantoyo.bsky.social
Telomere-to-telomere genome assembly of a male goat reveals variants associated with cashmere traits. #GoatGenome #ChromosomeLevelAssembly #CashmereTraits @naturecomms.bsky.social
www.nature.com/articles/s41...
Telomere-to-telomere genome assembly of a male goat reveals variants associated with cashmere traits - Nature Communications
Species genomes are important for analyses of genetic variation. Wu et al. assembled a T2T genome of a male cashmere goat, including 288.5 Mb of previously unresolved regions, and identified selective...
www.nature.com
December 22, 2024 at 12:16 AM
jsantoyo.bsky.social
A chromosome-level genome assembly of the European green toad (Bufotes viridis). #GreenToaddGenome #ChromosomeLevelAssembly #G3 🧬
academic.oup.com/g3journal/ad...
A chromosome-level genome assembly of the European green toad (Bufotes viridis)
Abstract. The European green toad (Bufotes viridis) is geographically widely distributed. While the species global conservation status is labeled as of lea
academic.oup.com
February 23, 2025 at 8:07 PM
jsantoyo.bsky.social
The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus. #FloweringCherry #ChromosomeLevelAssembly #Genomics @gigascience.bsky.social
academic.oup.com/gigascience/...
The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
AbstractBackground. Prunus campanulata, a species of ornamental cherry, holds significant genetic and horticultural value. Despite the availability of vari
academic.oup.com
February 22, 2025 at 11:40 PM
jsantoyo.bsky.social
Chromosome-level genome assembly of Indo-Pacific king mackerel (Scomberomorus guttatus). #KingMackerel #ChromosomeLevelAssembly #Genomics 🧬 #ScientificData
www.nature.com/articles/s41...
Chromosome-level genome assembly of Indo-Pacific king mackerel (Scomberomorus guttatus) - Scientific Data
Scientific Data - Chromosome-level genome assembly of Indo-Pacific king mackerel (Scomberomorus guttatus)
www.nature.com
November 16, 2024 at 5:26 PM
jsantoyo.bsky.social
Genome assembly of a living fossil, the Atlantic horseshoe crab Limulus polyphemus, reveals lineage-specific whole genome duplications, transposable element-based centromeres and a ZW sex chromosome system. #AtlanticHorseshoeCrabGenome #ChromosomeLevelAssembly 🧬
academic.oup.com/mbe/advance-...
Genome assembly of a living fossil, the Atlantic horseshoe crab Limulus polyphemus, reveals lineage-specific whole genome duplications, transposable element-based centromeres and a ZW sex chromosome s...
Abstract. Horseshoe crabs, considered living fossils with a stable morphotype spanning ∼445 million years, are evolutionarily, ecologically and biomedicall
academic.oup.com
February 10, 2025 at 11:25 PM
jsantoyo.bsky.social
Chromosome-level genome assembly of banaba (Lagerstroemia speciosa L.) #Banaba #ChromosomeLevelAssembly #Genomics 🧬 #ScientificData
www.nature.com/articles/s41...
Chromosome-level genome assembly of banaba (Lagerstroemia speciosa L.) - Scientific Data
Scientific Data - Chromosome-level genome assembly of banaba (Lagerstroemia speciosa L.)
www.nature.com
November 16, 2024 at 5:23 PM
jsantoyo.bsky.social
The telomere-to-telomere (T2T) genome provides insights into the evolution of specialized centromere sequences in sandalwood. #SandalwoodGenome #ChromosomeLevelAssembly #Centromere @gigascience.bsky.social
academic.oup.com/gigascience/...
Source: https://academic.oup.com/gigascience/article/doi/10.1093/gigascience/giae096/7921171
December 17, 2024 at 4:18 PM
jsantoyo.bsky.social
Assembling chromosome-level genomes of male and female Chanodichthys mongolicus using PacBio HiFi reads and Hi-C technologies. #MongolianRedfinGenome #ChromosomeLevelAssembly #HiFi #HiC #ScientifcData 🧬 🖥️
www.nature.com/articles/s41...
June 11, 2025 at 8:31 AM
jsantoyo.bsky.social
A haplotype-resolved reference genome for Eucalyptus grandis. #EucalyptusGrandisGenome #ReferenceGenome #ChromosomeLevelAssembly #G3
academic.oup.com/g3journal/ad...
academic.oup.com
June 2, 2025 at 9:15 AM
jsantoyo.bsky.social
A chromosome-level reference genome for the common bed bug, Cimex lectularius, with identification of sex chromosomes. #BedBugGenome #ChromosomeLevelAssembly #JournalOfHeredity 🧬
academic.oup.com/jhered/advan...
Source: https://academic.oup.com/jhered/advance-article-pdf/doi/10.1093/jhered/esae071/60884841/esae071.pdf
December 16, 2024 at 9:52 PM
jsantoyo.bsky.social
The high-quality telomere-to-telomere genome assembly of the earthworm (Amynthas aspergillum). #EarthwormGenome #ChromosomeLevelAssembly #Genomics #ScientificData
www.nature.com/articles/s41...
June 4, 2025 at 8:31 AM
jsantoyo.bsky.social
Chromosome-level genome assembly and annotation of a sea toad (Chaunax sp.). #SeqToadGenome #ChromosomeLevelAssembly #ScientificData #Genomics 🧬
www.nature.com/articles/s41...
Chromosome-level genome assembly and annotation of a sea toad (Chaunax sp.) - Scientific Data
Scientific Data - Chromosome-level genome assembly and annotation of a sea toad (Chaunax sp.)
www.nature.com
December 19, 2024 at 10:25 PM
jsantoyo.bsky.social
Small but mitey: a gapless telomere-to-telomere assembly of an unidentified mite with a streamlined genome. #EriophyoidMiteGenome #ChromosomeLevelAssembly #Genomics @genomebiolevol.bsky.social
academic.oup.com/gbe/advance-...
Small but mitey: a gapless telomere-to-telomere assembly of an unidentified mite with a streamlined genome
Abstract. A draft assembly of the rainforest tree Rhodamnia argentea Benth. (malletwood, Myrtaceae) revealed contaminating DNA sequences that most closely
academic.oup.com
February 23, 2025 at 12:04 AM
jsantoyo.bsky.social
The complete genome assembly of Nicotiana benthamiana reveals the genetic and epigenetic landscape of centromeres. #NicotianaBenthamiana #ChromosomeLevelAssembly #Centromeres #Genomics #SciSky #BioSky @natureplants.bsky.social
www.nature.com/articles/s41...
The complete genome assembly of Nicotiana benthamiana reveals the genetic and epigenetic landscape of centromeres - Nature Plants
This study generates and phases the complete genome assembly of a model plant Nicotiana benthamiana, revealing insights into the structure, epigenetic landscape and evolutionary dynamics of its centro...
www.nature.com
November 16, 2024 at 11:22 AM
jsantoyo.bsky.social
Chromosome-level reference genome assembly for the mountain hare (Lepus timidus). #MountainHareGenome #ChromosomeLevelAssembly #Genomics 🧬 @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
Source: https://www.biorxiv.org/content/10.1101/2024.06.10.598177v2.full.pdf
December 11, 2024 at 9:05 PM
jsantoyo.bsky.social
A chromosome-scale genome assembly of the leaf roller, Eumorphobotys obscuralis (Lepidoptera: Pyralidae). #LeafRollerGenome #ChromosomeLevelAssembly #Genomics #ScientificData
www.nature.com/articles/s41...
June 27, 2025 at 8:31 AM