Sriranga Kashyap
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srikash.bsky.social
Sriranga Kashyap
@srikash.bsky.social
Engineer/Neuroimaging scientist. Social introvert, liberal conservative, cheerful pessimist, and devout atheist. Also, overbearingly modest and deceptively honest.
Reposted by Sriranga Kashyap
On 🧠 #WorldBrainDay, let me highlight “Advancing Clinical and Neuroscientific Research Through Accessible and Optimized Protocol Design at 3T” by @srikash.bsky.social and Kâmil Uludağ, PhD (@uhn.ca, @uoft.bsky.social)

🔗 github.com/BRAIN-TO/bto...

#MRI #NeuroSky #OpenScience @mritobi.bsky.social
GitHub - BRAIN-TO/bto_mri_protocols_info: This is a repository of wiki, code and containers for post-processing data acquired using the BRAIN-TO imaging protocols on a Siemens Prisma 3 T
This is a repository of wiki, code and containers for post-processing data acquired using the BRAIN-TO imaging protocols on a Siemens Prisma 3 T - BRAIN-TO/bto_mri_protocols_info
github.com
June 22, 2025 at 2:43 PM
Reposted by Sriranga Kashyap
Our Siemens 7T Collaboration Scientist is moving to support the Siemens 7T Terra.X Impulse at Stanford. Siemens is rehiring for our position, located in Canada's National Ultra-High Field MRI platform cfmm.uwo.ca in London, Ontario 🇨🇦. onehealthineers.wd3.myworkdayjobs.com/SHSJB/job/OA...
Centre of Functional and Metabolic Mapping - Western University
Western University, in vibrant London, Ontario, delivers an academic and student experience second to none.
cfmm.uwo.ca
June 10, 2025 at 2:41 PM
Reposted by Sriranga Kashyap
We are pleased to announce the next AFNI Bootcamp, May 28-30, 2025.

First 2 days: data visualization, single subject analysis and QC. 3rd day: statistics, results reporting and group analysis.

Please see here for details, registration link and preliminary schedule:
afni.nimh.nih.gov/bootcamp
AFNI Bootcamp: May 28-30, 2025 | afni.nimh.nih.gov
afni.nimh.nih.gov
May 7, 2025 at 6:37 PM
Reposted by Sriranga Kashyap
New paper in Imaging Neuroscience by Viktor Pfaffenrot, David G. Norris, et al:

Characterizing BOLD activation patterns in the human hippocampus with laminar fMRI

doi.org/10.1162/imag...
April 14, 2025 at 6:24 AM
Reposted by Sriranga Kashyap
The result of a large (42 authors!) collaboration:
"Go Figure: Transparency in neuroscience images preserves context and clarifies interpretation"
arxiv.org/abs/2504.07824
TL;DR: The FMRI world can (and should) improve results interpretation and reproducibility *today*, via transparent thresholding.
April 11, 2025 at 12:35 PM
Reposted by Sriranga Kashyap
Mark you calendar for the exciting upcoming ISMRM workshop on UHF & fMRI. March 31st-April 2nd 2025, in Annapolis, MD, USA.
Website (being populated): www.ismrm.org/workshops/20...
Preliminary program in figure.
December 5, 2024 at 8:54 PM
Reposted by Sriranga Kashyap
For lack or recent publications, a link to our review article on myelin mapping with MRI and PET. Main lesson: The moment the manuscript is accepted, it is outdated. And the fear that something important may have been overlooked. Also: There is no good myelin mapping technique.

bit.ly/3RfqnkA
Quantitative myelin imaging with MRI and PET: an overview of techniques and their validation status
van der Weijden et al. review myelin imaging techniques and discuss their differences on a biophysical level. They conclude that the most promising techniq
bit.ly
December 5, 2024 at 3:33 AM
Reposted by Sriranga Kashyap
#MRITogether Day 3 (1/2) is also full of super stars, including @sbollmann.bsky.social 😍

There is still to register: mritogether.esmrmb.org/24m/registra...
November 29, 2024 at 7:33 PM
Reposted by Sriranga Kashyap
Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography.

Amazing technique by Walsh et al: www.nature.com/articles/s41...
November 24, 2024 at 9:03 AM
When you figure out the right flags and parameters, and have @chauffer_afni make multiple pretty pictures for all 80 participants’ #MRI data 💪
a man wearing a helmet with the words i have never felt power like this before written below him .
ALT: a man wearing a helmet with the words i have never felt power like this before written below him .
media.tenor.com
November 21, 2024 at 3:30 PM
Reposted by Sriranga Kashyap
My first post on bluesky and quite on brand - moving here to experience the open science and serendipitous virtual water cooler discussions good ol' twitter used to have. If you want this in distilled form, join us for #MRITogether24 Dec 3-6th online, open and free: mritogether.esmrmb.org/24m/
November 21, 2024 at 2:44 PM
Reposted by Sriranga Kashyap
Hey Bluesky people! I want to invite you to attend the MRI Together workshop, a free virtual global event dedicated to fostering open, reproducible, and inclusive MR research generously supported by ESMRMB. This event will be held across multiple time zones between 3-6 December 2023.
November 20, 2024 at 1:35 PM
Reposted by Sriranga Kashyap
77 people in the starter pack! What a network! And #protip: if you add #MRI or #MRS to your post, they will automatically show up in the MRISky feed, which is also included in the pack! go.bsky.app/EVqd6pe
November 20, 2024 at 4:30 PM
Pretty much how I learnt AFNI (with help from @storrisi.bsky.social, of course!).
afni_proc.py is the OG customisable fMRI pipeline builder!
Unmatched documentation, and modern examples!
New paper in Imaging Neuroscience by Richard C. Reynolds, Paul A. Taylor, et al:

Processing, evaluating, and understanding FMRI data with afni_proc.py

doi.org/10.1162/imag...
November 19, 2024 at 5:16 PM
Hello world! I’m glad to be off Twitter. Hoping grass is truly green on BlueSky!
November 16, 2024 at 4:43 AM