Raphael Mangione
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raphaelmngn.bsky.social
Raphael Mangione
@raphaelmngn.bsky.social
Postdoc @Whitehouse lab (MSKCC, NY). Previous: PhD candidate @Palancade lab (IJM, Paris) | DNA:RNA hybrids - DNA Replication - Transcription
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🎉 Exciting News! 🎉

I’m super excited to share that my PhD work has just been published in Nature Communications! ✨

If you're curious about the discoveries we made, feel free to check out the thread below 😉.

Thanks to everyone who has been part of this journey! 🚀🧬

Full article : rdcu.be/ec1ET
Reposted by Raphael Mangione
Checkout our latest research in @natcomms.nature.com
rdcu.be/eBqBI A high-resolution, nanopore-based artificial intelligence assay for DNA replication stress in human cancer cells. A collaboration with Mike Boemo’s team
A high-resolution, nanopore-based artificial intelligence assay for DNA replication stress in human cancer cells
Nature Communications - Determining how replication forks move across the human genome is critical for the effective use of agents that target replication stress. Here, the authors present...
rdcu.be
September 1, 2025 at 10:04 AM
Reposted by Raphael Mangione
We are hiring!
We are looking for a motivated and enthusiastic postdoc to study mammalian DSB repair using innovative genomic approaches.
Our lab is at the Curie Institute in Paris and offers vibrant scientific environnement and cutting edge platforms.
Please repost or apply here:
lnkd.in/eJ9q3QrR
Institut Curie hiring Postdoctoral Position in Mammalian DSB Repair (F/M) in Paris, Île-de-France, France | LinkedIn
Posted 8:04:09 PM. About UsInstitut Curie Research CenterInstitut Curie is a major player in the research and fight…See this and similar jobs on LinkedIn.
lnkd.in
August 1, 2025 at 9:38 AM
Reposted by Raphael Mangione
Our paper is now out in Molecular Cell!

Check the thread in this former post:

www.cell.com/molecular-ce...
July 17, 2025 at 5:41 PM
Reposted by Raphael Mangione
Hi everyone!

The latest method from the Whitehouse lab: PCP


PCP uses a novel proximity barcoding strategy to simultaneously map 3D genome organization at various resolutions at the single molecule level:

Out soon, check the updated BioRxiv – little thread:

1/11
www.biorxiv.org/content/10.1...
May 30, 2025 at 7:55 PM
Reposted by Raphael Mangione
New paper! Most human DNA replication initiation is dispersed throughout the genome with only a minority within previously identified initiation zones

genomebiology.biomedcentral.com/articles/10....

Identifying human DNA replication initiation sites on single molecules by @nanoporetech.com 1/7
Most human DNA replication initiation is dispersed throughout the genome with only a minority within previously identified initiation zones - Genome Biology
Background The identification of sites of DNA replication initiation in mammalian cells has been challenging. Here, we present unbiased detection of replication initiation events in human cells using ...
genomebiology.biomedcentral.com
May 12, 2025 at 10:35 AM
Reposted by Raphael Mangione
Hello World! Are you passionate about epigenomics and evolution 🧪🧬🐭🐵 ? Are you looking for a postdoc in a stimulating and inclusive environment ? Look no further... We are seeking creative postdocs for our ERC project EvoEpi @igred.fr ! 👇Details👇
tinyurl.com/PostdocEvoEp...
Repost are appreciated
March 31, 2025 at 1:26 PM
🐣 What comes first — R-loops or genome instability?

There’s now a Behind the Paper to go with our recent study on the interplay between R-loops and DNA damage — with some context, backstory, and the chicken-and-egg question at its core.

Check it out 👉 go.nature.com/4ldXbJm
R-loops and Genetic Instability: a Chicken and Egg Problem
Investigating the relationships between R-loops and genetic instability led to the discovery that some DNA:RNA hybrids actually arise as a consequence of DNA lesions.
go.nature.com
April 6, 2025 at 3:23 PM
Reposted by Raphael Mangione
How are chromosome breaks repaired and how is their repair influenced and facilitated by nuclear and genome dynamics? Fantastic initiative and collaboration with @karimmekhail.bsky.social, @chiololab.bsky.social, and @lablegube.bsky.social. @natrevmcb.bsky.social Link to article: rdcu.be/edViW
Nuclear and genome dynamics underlying DNA double-strand break repair
Nature Reviews Molecular Cell Biology - Changes in nuclear and genome organization promote the repair of DNA double-strand breaks and genome stability. Processes that are involved include the...
rdcu.be
March 18, 2025 at 4:32 PM
Reposted by Raphael Mangione
Much grateful to @agencerecherche.bsky.social , @fondationarc.bsky.social and Ligue Nationale contre le Cancer for funding this project ! (7/8)
March 11, 2025 at 4:42 PM
Reposted by Raphael Mangione
Congratulations to first author @raphaelmngn.bsky.social and many thanks to all our great collaborators 🧑‍🎓 - Rodney Rothstein @columbiamed.bsky.social, Sergio de Almeida @gimmfoundation.bsky.social, Peter Stirling @BCCancer and Pierre-Henri Gaillard @crcm.bsky.social (6/8)
March 11, 2025 at 4:42 PM
Reposted by Raphael Mangione
Such « post-lesion » hybrids can be detected in yeast and human cells, yet they do not detectably impact genome stability, as opposed to « pre-lesion » hybrids - a revisited classification? (5/8)
March 11, 2025 at 4:42 PM
Reposted by Raphael Mangione
For example, focusing on Okazaki fragments (OF) processing, we found that the accumulation of unprocessed flaps or unligated OF termini is the source of hybrid formation 🧬 (4/8)
March 11, 2025 at 4:42 PM
Reposted by Raphael Mangione
We identified several situations where DNA:RNA hybrids are associated with genetic instability – strikingly, in most cases, DNA lesions appear to precede hybrid formation 🔃 (3/8)
March 11, 2025 at 4:42 PM
🎉 Exciting News! 🎉

I’m super excited to share that my PhD work has just been published in Nature Communications! ✨

If you're curious about the discoveries we made, feel free to check out the thread below 😉.

Thanks to everyone who has been part of this journey! 🚀🧬

Full article : rdcu.be/ec1ET
March 11, 2025 at 7:00 PM
Reposted by Raphael Mangione
In this study, we systematically explored the relationships between DNA:RNA hybrid formation and genetic instability, through a suite of genetic screens in yeast 🧬 (2/8)
March 11, 2025 at 4:42 PM
Reposted by Raphael Mangione
Pleased to launch the Palancade lab Bluesky account with our new paper 📝, now out at @naturecomms.bsky.social (1/8)
March 11, 2025 at 4:42 PM