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openmicroscopy.org
OME
@openmicroscopy.org
OME is a consortium of universities, research labs, industry and developers producing open-source software and format standards for microscopy data.

https://www.openmicroscopy.org/
BioFile Finder allows the browsing of image thumbnails which enables launching of images in full view via a range of image viewers. We hope this is useful!
August 6, 2025 at 4:28 PM
Example idr0170 image shown in OME-NGFF-Validator: ome.github.io/ome-ngff-val...
August 6, 2025 at 4:28 PM
Idr0170: Released ahead of its publication - Imaging Mass Cytometry Dataset of Small-Cell Lung Cancer tumors and tumor microenvironments by Rose et al. Images in idr0170 are OME-Zarrs converted by the submitter.
idr.openmicroscopy.org/search/?quer...
August 6, 2025 at 4:28 PM
July 25, 2025 at 9:03 AM
New landing pages have landed for every study in the Image Data Resource (IDR)!
Now, you can easily see clear details of the study - including how to download the data!
To access the landing page for a study, just click on its thumbnail from the homepage (idr.openmicroscopy.org).
July 25, 2025 at 9:03 AM
New study released in the Image Data Resource (IDR, idr.openmicroscopy.org) today!

An embryonic patterning study from elifesciences.org/articles/78902 by Clark et al.
idr.openmicroscopy.org/search/?quer...
July 10, 2025 at 3:23 PM
The #globalbioimaging couse at IISER Pune continued with an intense and well-received OMERO workshop part 1. The parts 2 and 3 of the OMERO workshoop to come tomorrow.
June 19, 2025 at 12:48 PM
On the #globalbioimaging course globalbioimaging.org/internationa... at IISER Pune, India, the discussions go on after the talk about Microscopy Facility Data Management strategies.
June 18, 2025 at 1:12 PM
On #ELMI2025 an ad-hoc Question&Answer session on OMERO went very well, lively discussion with lot of tips on finding the optimal path to successful OMERO adoption in an Institution.
June 4, 2025 at 10:15 AM
May 9, 2025 at 3:30 PM
2. A morphology and secretome map of pyroptosis from the recently published www.molbiolcell.org/doi/10.1091/... by Lippincott et al.
idr.openmicroscopy.org/search/?quer...
May 9, 2025 at 3:30 PM
Take a look at the three new studies released in the Image Data Resource (IDR, idr.openmicroscopy.org).
1. 3D-SIM data from www.nature.com/articles/s41... by Szabo et al.
idr.openmicroscopy.org/search/?quer...
May 9, 2025 at 3:30 PM
2. Large-scale hyperspectral #electronmicroscopy data from www.nature.com/articles/s44... by Duinkerken et al.
idr.openmicroscopy.org/search/?quer...
February 21, 2025 at 3:37 PM
Take a look at the two new studies released in the Image Data Resource (IDR, idr.openmicroscopy.org).

1. Light sheet fluorescence microscopy of Tribolium castaneum embryos from journals.biologists.com/dev/article/... by Strobl et al.
idr.openmicroscopy.org/search/?quer...
February 21, 2025 at 3:36 PM
December 7, 2024 at 9:47 PM
The one-day OMERO workshop given as a part of the Imaging course organized by CEITEC - Central European Institute of Technology, Brno, just ended. Very intesive workshop with lively discussions about IDR metadata and OMERO.figure.
December 6, 2024 at 4:38 PM
The recent OMERO.server 5.6.14 release included a bunch of new Look-up tables listed at github.com/ome/openmicr... to add to a growling list!
Thanks to Tom Boissonnet and @gerbi.bsky.social
November 27, 2024 at 11:10 AM