Olga Francino
@olgafrancino01.bsky.social
Reposted by Olga Francino
New preprint! Autocycler is a tool for long-read consensus assembly of bacterial genomes. It's like Trycycler but can be run fully automated (without any human intervention).
www.biorxiv.org/content/10.1...
(1/6)
www.biorxiv.org/content/10.1...
(1/6)
Autocycler: long-read consensus assembly for bacterial genomes
Motivation Long-read sequencing enables complete bacterial genome assemblies, but individual assemblers are imperfect and often produce sequence-level and structural errors. Consensus assembly using T...
www.biorxiv.org
May 21, 2025 at 3:29 AM
New preprint! Autocycler is a tool for long-read consensus assembly of bacterial genomes. It's like Trycycler but can be run fully automated (without any human intervention).
www.biorxiv.org/content/10.1...
(1/6)
www.biorxiv.org/content/10.1...
(1/6)
Reposted by Olga Francino
Delighted to see launch of ARTIC-2 project - colleagues @aineotoole.bsky.social @arambaut.bsky.social and @rmcolq.bsky.social working with @pathogenomenick.bsky.social @articnetwork.bsky.social to develop low-cost pathogen genome sequencing 🧪🦠🧫
edinburgh-infectious-diseases.ed.ac.uk/news-and-eve...
edinburgh-infectious-diseases.ed.ac.uk/news-and-eve...
May 23, 2025 at 1:01 PM
Delighted to see launch of ARTIC-2 project - colleagues @aineotoole.bsky.social @arambaut.bsky.social and @rmcolq.bsky.social working with @pathogenomenick.bsky.social @articnetwork.bsky.social to develop low-cost pathogen genome sequencing 🧪🦠🧫
edinburgh-infectious-diseases.ed.ac.uk/news-and-eve...
edinburgh-infectious-diseases.ed.ac.uk/news-and-eve...