Oxford is great

Then use precon_all to automate the cortical surface reconstruction for you! Better yet, create a surface template for spatial normalization using your unique species data 7/10

What if it fails though (And let's be honest, it might sometimes)? Then you edit as if it were a human brain in Freesurfer and rerun the filling and tessellation steps. 5/10

Its design models Freesurfer, including built in modularity for separated brain extraction, segmentation, and filling and tessellation. If you've run Freesurfer for your human data then the output and interface should hopefully be a seamless experience 3/10

Precon_all is finally citeable! I’m relieved, pleased, thrilled and all other superlatives to present to you our preprint describing the inner workings of the precon_all pipeline for semi-automated non-human cortical surface reconstruction! www.biorxiv.org/content/10.1... 1/10

Had a quick pit stop back in Paris. Was great to have lunch with @k4tj4.bsky.social and @r3rt0.bsky.social and talk about 🧠

In the process of moving I can’t help but think that vacuum bagging a pillow is an excellent way to show how physical forces can change a structures shape #folding

Nice to see my PhD thesis represented as Christmas decorations in Strasbourg