jules-vanaret.bsky.social
@jules-vanaret.bsky.social
Reposted
Quatre années plus tard
Des copains, des souvenirs
Et un doctorat
🍾🎓
October 11, 2025 at 3:37 PM
Reposted
#geff v1 is released! 🎉 GEFF is a zarr-based Graph Exchange File Format with special support for tracking applications in Python and Java. Thank you to all the amazing developers who contributed at the Janelia 2025 Trackathon! liveimagetrackingtools.org/geff/
October 7, 2025 at 8:24 PM
Reposted
Congratulations @alicegros.bsky.social @jules-vanaret.bsky.social & @dunsingvalentin.bsky.social for this huge team effort! Gastruloids morphogenesis is so fascinating and now we can explore and travel through them in 3D & at cell resolution day and night 🤩
So excited to share my 1st paper !!🌞
Co-authored with @jules-vanaret.bsky.social @dunsingvalentin.bsky.social, we developped an integrated pipeline for imaging, segmenting and analysing cell-scale patterns in gene expression + tissue properties in complex 3D tissues
elifesciences.org/reviewed-pre...
A quantitative pipeline for whole-mount deep imaging and analysis of multi-layered organoids across scales
elifesciences.org
July 16, 2025 at 7:21 AM
Reposted
So excited to share my 1st paper !!🌞
Co-authored with @jules-vanaret.bsky.social @dunsingvalentin.bsky.social, we developped an integrated pipeline for imaging, segmenting and analysing cell-scale patterns in gene expression + tissue properties in complex 3D tissues
elifesciences.org/reviewed-pre...
A quantitative pipeline for whole-mount deep imaging and analysis of multi-layered organoids across scales
elifesciences.org
July 15, 2025 at 11:39 AM