Jitu George
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Jitu George
@jitu1.bsky.social
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Single cell manager at UMGC. Dabbling in single-cell and sometimes spatial.
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Reposted by Jitu George
bbparis1984.bsky.social
New Skeetorial time! 🦋
A new preprint led by Dr. #MinhooKim, where we present the characterization of #mouse models of #menopause using a combination of histology, endocrine measures, single-cell #transcriptomics, and #RNAscope validation! #GeroSky 🧪🖥️🧬 A 🧵 1/9
www.biorxiv.org/content/10.1...
June 16, 2025 at 11:21 AM
Reposted by Jitu George
jef.works
We identify evidence of off-target probe binding in the 10x Genomics #Xenium v1 Human Breast Gene Expression Panel, compromising the accuracy of resulting #singlecell #spatialtranscriptomics profiles

See our preprint for more details: www.biorxiv.org/content/10.1...

#AcademicSky

🧵👇 1/n
Evidence of off-target probe binding in the 10x Genomics Xenium v1 Human Breast Gene Expression Panel compromises accuracy of spatial transcriptomic profiling
The accuracy of spatial gene expression profiles generated by probe-based in situ spatially-resolved transcriptomic technologies depends on the specificity with which probes bind to their intended tar...
www.biorxiv.org
April 3, 2025 at 3:35 PM
Reposted by Jitu George
lgmartelotto.bsky.social
www.biorxiv.org/content/10.1...
Sequencing-free whole genome spatial transcriptomics at molecular resolution in intact tissue
Recent breakthroughs in spatial transcriptomics technologies have enhanced our understanding of diverse cellular identities, compositions, interactions, spatial organizations, and functions. Yet exist...
www.biorxiv.org
March 23, 2025 at 5:30 AM
Reposted by Jitu George
jcellsci.bsky.social
Our latest interview is with Manu Prakash @prakashlab.bsky.social. We discuss Manu’s career path and his scientific philosophy. Manu is one of our plenary speakers at #biologists100, where he’ll be speaking about emerging technologies.
journals.biologists.com/jcs/article/...
Manu with his lab members
March 20, 2025 at 3:32 PM
Reposted by Jitu George
caleblareau.bsky.social
Trying a slightly new model (for us at least) of #openscience. With @ronanchaligne.bsky.social and @karolisk.bsky.social, we pitted 10x Genomics Chromium GEM-X against Illumina PIPseq V head-to-head to understand these two platforms for single-cell genomics. Some thoughts off the bleeding edge: /1
a baby is eating a piece of food while sitting on the ground .
ALT: a baby is eating a piece of food while sitting on the ground .
media.tenor.com
March 14, 2025 at 1:29 PM
Reposted by Jitu George
hansonmark.bsky.social
This #InternationalWomensDay I want to tell the story of Lilian Vaughan Morgan. I learned of Lilian this past year - what a badass.

Lilian was a leading scientist when women weren't welcome in the lab, nor even the department. But she contributed immensely to the genetics of sex determination

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A photo of a young Lilian Vaughan Morgan, sitting with a book on her lab staring into the distance. A photo of an older Lilian Vaughan Morgan, sitting at a lab bench with a microscope and dozens of glass milk bottles bunged with cotton. Lilian is in the middle of applying ether to anaesthetize a bottle of flies.
March 8, 2025 at 10:39 AM
Reposted by Jitu George
martinalexsmith.bsky.social
My favourite talk so far, @mich-lipi.bsky.social from @broadinstitute.org presented stacked #Illumina spatial slides of the mouse brain transcriptome with subcellular resolution #AGBTGM
I'm sold on spatial now...
February 26, 2025 at 5:27 AM
Reposted by Jitu George
jsantoyo.bsky.social
EasyPubPlot: a shiny web application for rapid omics data exploration and visualization. #EasyPublishablePlotting #Shiny #R #DataExploration @biorxivpreprint.bsky.social 🧬 🖥️
www.biorxiv.org/content/10.1...
Source: https://www.biorxiv.org/content/10.1101/2024.11.26.625339v1.full Fig 1. The main functionality of EasyPubPlot with a heatmap plot example
December 1, 2024 at 7:48 PM