Unité INRAE MaIAGE
@inrae-maiage.bsky.social
Unité Mathématique et informatique appliquées du génome à l’environnement (MaIAGE – UR INRAE)
Nous y étions et avons participé activement aux FROGSDays 2025 ✨, un rendez-vous marqué par le partage 🤝, l’innovation 🔬 et les échanges autour du métabarcoding microbien.
Plus d'information : lnkd.in/d3A7qN4n
Plus d'information : lnkd.in/d3A7qN4n
December 4, 2025 at 9:50 AM
Nous y étions et avons participé activement aux FROGSDays 2025 ✨, un rendez-vous marqué par le partage 🤝, l’innovation 🔬 et les échanges autour du métabarcoding microbien.
Plus d'information : lnkd.in/d3A7qN4n
Plus d'information : lnkd.in/d3A7qN4n
🎉 Félicitations à Ekaterian Tomilina, pour sa soutenance de thèse ! 🎉
December 4, 2025 at 8:05 AM
🎉 Félicitations à Ekaterian Tomilina, pour sa soutenance de thèse ! 🎉
🎉 Félicitations à Antoine Caillebotte, pour sa soutenance de thèse ! 🎉
December 4, 2025 at 8:03 AM
🎉 Félicitations à Antoine Caillebotte, pour sa soutenance de thèse ! 🎉
We are #hiring a Stage for a 6 mois period on Inverse Problems and Data Integration for Microbial Biofilm Resistance to Pathogen Invasion, starting 2026-04-01.
Application to Lorenzo Sala, Béatrice Laroche, by 2026-02-28.
More information at maiage.inrae.fr/node/3457.
Application to Lorenzo Sala, Béatrice Laroche, by 2026-02-28.
More information at maiage.inrae.fr/node/3457.
November 26, 2025 at 7:32 AM
We are #hiring a Stage for a 6 mois period on Inverse Problems and Data Integration for Microbial Biofilm Resistance to Pathogen Invasion, starting 2026-04-01.
Application to Lorenzo Sala, Béatrice Laroche, by 2026-02-28.
More information at maiage.inrae.fr/node/3457.
Application to Lorenzo Sala, Béatrice Laroche, by 2026-02-28.
More information at maiage.inrae.fr/node/3457.
We are #hiring a Stage for a 6 mois period on Stage M2 - Inférence bayésienne et identification de variants dans les données métagénomiques: méthodes de sous-échantillonnage pour les données massives., starting 2026-02-01.
More information at maiage.inrae.fr/node/3455.
More information at maiage.inrae.fr/node/3455.
November 17, 2025 at 11:48 AM
We are #hiring a Stage for a 6 mois period on Stage M2 - Inférence bayésienne et identification de variants dans les données métagénomiques: méthodes de sous-échantillonnage pour les données massives., starting 2026-02-01.
More information at maiage.inrae.fr/node/3455.
More information at maiage.inrae.fr/node/3455.
We are #hiring a Stage for a 6 mois period on Analysis of spatial patterns formed during Prion dissemination in cerebellar tissue., starting 2026-03-02. Application to Katarzyna Adamczyk, Florence Hubert, Mathieu Mezache, by 2026-01-30.
More information at maiage.inrae.fr/node/3452.
More information at maiage.inrae.fr/node/3452.
November 7, 2025 at 1:00 PM
We are #hiring a Stage for a 6 mois period on Analysis of spatial patterns formed during Prion dissemination in cerebellar tissue., starting 2026-03-02. Application to Katarzyna Adamczyk, Florence Hubert, Mathieu Mezache, by 2026-01-30.
More information at maiage.inrae.fr/node/3452.
More information at maiage.inrae.fr/node/3452.
🔷 Séminaire Schéma Stratégique du Département MathNum à Montpellier — une belle dynamique collective !
Plus d'info : www.linkedin.com/feed/update/...
Plus d'info : www.linkedin.com/feed/update/...
November 7, 2025 at 12:59 PM
🔷 Séminaire Schéma Stratégique du Département MathNum à Montpellier — une belle dynamique collective !
Plus d'info : www.linkedin.com/feed/update/...
Plus d'info : www.linkedin.com/feed/update/...
We are delighted to #welcome BOSSE Paul for a CDD on Development of digital tools for participatory epidemiological surveillance of wheat diseases as part of the PAPEETE project until 2026-10-31. A #collaboration with Florence Carpentier.
More information at maiage.inrae.fr/node/3444.
More information at maiage.inrae.fr/node/3444.
November 3, 2025 at 1:36 PM
We are delighted to #welcome BOSSE Paul for a CDD on Development of digital tools for participatory epidemiological surveillance of wheat diseases as part of the PAPEETE project until 2026-10-31. A #collaboration with Florence Carpentier.
More information at maiage.inrae.fr/node/3444.
More information at maiage.inrae.fr/node/3444.
We are delighted to #welcome Buttimore Aidan for a Doctorant.e on Robust inference in Hidden Markov Models until 2028-10-31. A #collaboration with Estelle Kuhn, Zacharie Naulet.
More information at maiage.inrae.fr/node/3439.
More information at maiage.inrae.fr/node/3439.
November 3, 2025 at 1:15 PM
We are delighted to #welcome Buttimore Aidan for a Doctorant.e on Robust inference in Hidden Markov Models until 2028-10-31. A #collaboration with Estelle Kuhn, Zacharie Naulet.
More information at maiage.inrae.fr/node/3439.
More information at maiage.inrae.fr/node/3439.
We are #hiring a Stage for a 6 mois period on Benchmark et développement d’un workflow d’identification et d’annotation de génomes de bactériophages., starting 2026-01-01.
Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30.
More information at maiage.inrae.fr/node/3437
Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30.
More information at maiage.inrae.fr/node/3437
October 22, 2025 at 7:09 AM
We are #hiring a Stage for a 6 mois period on Benchmark et développement d’un workflow d’identification et d’annotation de génomes de bactériophages., starting 2026-01-01.
Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30.
More information at maiage.inrae.fr/node/3437
Application to Cédric MIDOUX, Valentin LOUX, Eric DUGAT-BONY, by 2026-06-30.
More information at maiage.inrae.fr/node/3437
We are delighted to #welcome PRAGASSAM Anthony for a Fixed-term contract as an engineer in Galaxy component development until 2028-01-31. A #collaboration with Valentin Loux.
More information at maiage.inrae.fr/node/3428.
More information at maiage.inrae.fr/node/3428.
October 15, 2025 at 2:17 PM
We are delighted to #welcome PRAGASSAM Anthony for a Fixed-term contract as an engineer in Galaxy component development until 2028-01-31. A #collaboration with Valentin Loux.
More information at maiage.inrae.fr/node/3428.
More information at maiage.inrae.fr/node/3428.
We are #hiring a Stage for a 6 mois period on Exploration of the pangenome to automatically delineate ICE and IME mobile elements, starting 2026-01-01.
More information at maiage.inrae.fr/node/3422.
More information at maiage.inrae.fr/node/3422.
October 10, 2025 at 11:36 AM
We are #hiring a Stage for a 6 mois period on Exploration of the pangenome to automatically delineate ICE and IME mobile elements, starting 2026-01-01.
More information at maiage.inrae.fr/node/3422.
More information at maiage.inrae.fr/node/3422.
We are #hiring a Stage for a 6 mois period on Detecting genomic modules across multiple pangenomes using MultiGraph Neural Network, starting 2026-01-01.
More information at maiage.inrae.fr/node/3421.
More information at maiage.inrae.fr/node/3421.
October 10, 2025 at 6:24 AM
We are #hiring a Stage for a 6 mois period on Detecting genomic modules across multiple pangenomes using MultiGraph Neural Network, starting 2026-01-01.
More information at maiage.inrae.fr/node/3421.
More information at maiage.inrae.fr/node/3421.
We are delighted to #welcome BERNE Edmond for a CDD on "Holobionts data integration" until 2026-09-30. A #collaboration with Olivier Rué, Fabrice Legeai.
More information at maiage.inrae.fr/node/3417.
More information at maiage.inrae.fr/node/3417.
October 6, 2025 at 9:53 AM
We are delighted to #welcome BERNE Edmond for a CDD on "Holobionts data integration" until 2026-09-30. A #collaboration with Olivier Rué, Fabrice Legeai.
More information at maiage.inrae.fr/node/3417.
More information at maiage.inrae.fr/node/3417.
We are delighted to #welcome FERNANDEZ Émilie for a CDD on "Development of the Ferments du Futur data warehouse" until 2032-12-15. A #collaboration with Loux, V.
More information at maiage.inrae.fr/node/3416.
More information at maiage.inrae.fr/node/3416.
October 6, 2025 at 9:52 AM
We are delighted to #welcome FERNANDEZ Émilie for a CDD on "Development of the Ferments du Futur data warehouse" until 2032-12-15. A #collaboration with Loux, V.
More information at maiage.inrae.fr/node/3416.
More information at maiage.inrae.fr/node/3416.
Organisation of and participation in a workshop at Caltech, Pasadena, California, on the theme of ‘Multiscale modelling of ocular and cardiovascular systems’ from 29 September to 3 October 2025. At the American Institute of Mathematics.
More information aimath.org/workshops/up...
More information aimath.org/workshops/up...
October 2, 2025 at 3:00 PM
Organisation of and participation in a workshop at Caltech, Pasadena, California, on the theme of ‘Multiscale modelling of ocular and cardiovascular systems’ from 29 September to 3 October 2025. At the American Institute of Mathematics.
More information aimath.org/workshops/up...
More information aimath.org/workshops/up...
We are #hiring a Stage for a 6 mois period on Development of workflows for pangenome graph functional annotation at large scale, starting 2026-01-05.
More information at maiage.inrae.fr/node/3413.
More information at maiage.inrae.fr/node/3413.
October 1, 2025 at 2:12 PM
We are #hiring a Stage for a 6 mois period on Development of workflows for pangenome graph functional annotation at large scale, starting 2026-01-05.
More information at maiage.inrae.fr/node/3413.
More information at maiage.inrae.fr/node/3413.
We are thrilled to be involved in the Statistics and machine learning predictive tools for transition toward sustainable agriculture: dynamic modeling and heterogeneous population #project.
More information at maiage.inrae.fr/node/3080.
More information at maiage.inrae.fr/node/3080.
September 17, 2025 at 9:29 AM
We are thrilled to be involved in the Statistics and machine learning predictive tools for transition toward sustainable agriculture: dynamic modeling and heterogeneous population #project.
More information at maiage.inrae.fr/node/3080.
More information at maiage.inrae.fr/node/3080.
We are delighted to #welcome MARINO Thomas for a Doctorant.e on Mfd profiling and dynamic reshaping until 2028-09-30. A #collaboration with Sylvain Martheyet Gwenaëlle André à MaIAGE Gwenaëlle ANDRE (70%) et Nalini Rama Rao (30%).
More information at maiage.inrae.fr/node/3405.
More information at maiage.inrae.fr/node/3405.
September 5, 2025 at 10:13 AM
We are delighted to #welcome MARINO Thomas for a Doctorant.e on Mfd profiling and dynamic reshaping until 2028-09-30. A #collaboration with Sylvain Martheyet Gwenaëlle André à MaIAGE Gwenaëlle ANDRE (70%) et Nalini Rama Rao (30%).
More information at maiage.inrae.fr/node/3405.
More information at maiage.inrae.fr/node/3405.
We are delighted to #welcome GUEDOUAR Sana for a CDD on
Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31.
More: maiage.inrae.fr/node/3404.
Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31.
More: maiage.inrae.fr/node/3404.
September 3, 2025 at 9:47 AM
We are delighted to #welcome GUEDOUAR Sana for a CDD on
Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31.
More: maiage.inrae.fr/node/3404.
Adaptation de l’application Genoscapist pour l’étude de l’hétérogénéité phénotypique et l’adaptation à l'hôte pendant la phase stationnaire chez les Firmicutes pathogènes sporulants until 2026-03-31.
More: maiage.inrae.fr/node/3404.
We are delighted to #welcome VÉRON Joséphine for a CDD on Développement d'un système de culture en mini-bioréacteurs couplés pour limiter le développement de biofilms. until 2026-06-30.
A #collaboration with GUÉRIN Cyprien/
More information at maiage.inrae.fr/node/3398.
A #collaboration with GUÉRIN Cyprien/
More information at maiage.inrae.fr/node/3398.
September 1, 2025 at 12:32 PM
We are delighted to #welcome VÉRON Joséphine for a CDD on Développement d'un système de culture en mini-bioréacteurs couplés pour limiter le développement de biofilms. until 2026-06-30.
A #collaboration with GUÉRIN Cyprien/
More information at maiage.inrae.fr/node/3398.
A #collaboration with GUÉRIN Cyprien/
More information at maiage.inrae.fr/node/3398.
We are thrilled to be involved in the Plate-forme de CULTuromique partagée pour accéder à un large répertoire de mIcro-organismes, dont les non cultivéS, afin de comprendre les fonctions cléS des microbIoMes sur les écOsystèmes humains #project.
More information at maiage.inrae.fr/node/3397.
More information at maiage.inrae.fr/node/3397.
August 29, 2025 at 9:50 AM
We are thrilled to be involved in the Plate-forme de CULTuromique partagée pour accéder à un large répertoire de mIcro-organismes, dont les non cultivéS, afin de comprendre les fonctions cléS des microbIoMes sur les écOsystèmes humains #project.
More information at maiage.inrae.fr/node/3397.
More information at maiage.inrae.fr/node/3397.
We are delighted to #welcome LACOUR Geoffrey for a Post-doc on Modélisation mathématique et outils numériques pour l’analyse et la prédiction de consortia microbiens until 2026-10-31.
A #collaboration with Beatrice Laroche, Lorenzo Sala.
More information at maiage.inrae.fr/node/3396.
A #collaboration with Beatrice Laroche, Lorenzo Sala.
More information at maiage.inrae.fr/node/3396.
August 29, 2025 at 9:43 AM
We are delighted to #welcome LACOUR Geoffrey for a Post-doc on Modélisation mathématique et outils numériques pour l’analyse et la prédiction de consortia microbiens until 2026-10-31.
A #collaboration with Beatrice Laroche, Lorenzo Sala.
More information at maiage.inrae.fr/node/3396.
A #collaboration with Beatrice Laroche, Lorenzo Sala.
More information at maiage.inrae.fr/node/3396.
We are delighted to #welcome JOCHEL Jessy for a CDD on Gestionnaire d'unité until 2026-08-31.
A #collaboration with Khadija El-Mourabit, Aurore Lenfant.
More information at maiage.inrae.fr/node/3395.
A #collaboration with Khadija El-Mourabit, Aurore Lenfant.
More information at maiage.inrae.fr/node/3395.
August 29, 2025 at 9:07 AM
We are delighted to #welcome JOCHEL Jessy for a CDD on Gestionnaire d'unité until 2026-08-31.
A #collaboration with Khadija El-Mourabit, Aurore Lenfant.
More information at maiage.inrae.fr/node/3395.
A #collaboration with Khadija El-Mourabit, Aurore Lenfant.
More information at maiage.inrae.fr/node/3395.
We are delighted to #welcome LAMY Oriane for a CDD on Apprentissage :
Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A #collaboration with AL Abraham, G Kon Kam King.
More maiage.inrae.fr/node/3394.
Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A #collaboration with AL Abraham, G Kon Kam King.
More maiage.inrae.fr/node/3394.
August 25, 2025 at 1:16 PM
We are delighted to #welcome LAMY Oriane for a CDD on Apprentissage :
Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A #collaboration with AL Abraham, G Kon Kam King.
More maiage.inrae.fr/node/3394.
Développement de méthodes pour la détection de flux de souches à partir de données métagénomiques shotgun et application aux écosystèmes vigne-vin. A #collaboration with AL Abraham, G Kon Kam King.
More maiage.inrae.fr/node/3394.